RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 PRSS55Q6UWB4 352 aaPredicted RBP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 LARP4Q71RC2 724 aaKnown RBP eCLIP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 TAS1R1Q7RTX1 841 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 LILRA2Q8N149 483 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 PTGR2Q8N8N7 351 aaPredicted RBP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 DBF4BQ8NFT6 615 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 OR9I1Q8NGQ6 314 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 DLG3Q92796 817 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 C19orf60Q96EN9 201 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 DCUN1D1Q96GG9 259 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 CDKN2AIPNLQ96HQ2 116 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 C3orf30Q96M34 536 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 LRGUKQ96M69 825 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 BTBD9Q96Q07 612 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 MAGEH1Q9H213 219 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 ELAC1Q9H777 363 aaKnown RBP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 FBRSL1Q9HCM7 1045 aaKnown RBP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 SPATS2LQ9NUQ6 558 aaKnown RBP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 COMMD8Q9NX08 183 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 SCN8AQ9UQD0 1980 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 UBA6A0AVT1 1052 aaPredicted RBP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 LRRC14BA6NHZ5 514 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 PPP6CO00743 305 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 SNRPB2P08579 225 aaKnown RBP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 ALDOCP09972 364 aaKnown RBP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 MTHFD2P13995 350 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 HOXB8P17481 243 aaPredicted RBP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 ATP5C1P36542 298 aaKnown RBP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 SCNN1BP51168 640 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 ZNF140P52738 457 aaPredicted RBP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 RPS24P62847 133 aaKnown RBP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 FOLH1Q04609 750 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 PFKFB4Q16877 469 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 TYSND1Q2T9J0 566 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 UGT3A2Q3SY77 523 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 PAOXQ6QHF9 649 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 SPATA24Q86W54 205 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 BBS5Q8N3I7 341 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 SLC43A3Q8NBI5 491 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 RMDN1Q96DB5 314 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 ASB9Q96DX5 294 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 ATOH8Q96SQ7 321 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 AARSD1Q9BTE6 412 aaKnown RBP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 SPON2Q9BUD6 331 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 CINPQ9BW66 212 aaPredicted RBP9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 NACA2Q9H009 215 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 UNC93B1Q9H1C4 597 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 POPDC3Q9HBV1 291 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 SEPT3Q9UH03 358 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 DNMT3LQ9UJW3 386 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 RIMKLBQ9ULI2 386 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 SPO11Q9Y5K1 396 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 DNAJC15Q9Y5T4 150 aa9.29□□□□□ -0.92
UBLCP1-201ENST00000296786 PRSS51A0A1B0GVH4 220 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 H3BNC9 293 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 CDK14O94921 469 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 GJB5O95377 273 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 CRTAMO95727 393 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 SELPP16109 830 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 PSMD8P48556 350 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 CDH4P55283 916 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 SMARCB1Q12824 385 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 ILF2Q12905 390 aaKnown RBP9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 RALGDSQ12967 914 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 MTA1Q13330 715 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 TRIM25Q14258 630 aaKnown RBP9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 GPNMBQ14956 572 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 PDK3Q15120 406 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 GEN1Q17RS7 908 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 ANKS3Q6ZW76 656 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 GLT6D1Q7Z4J2 308 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 TMEM126BQ8IUX1 230 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 DENND1CQ8IV53 801 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 CLYBLQ8N0X4 340 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 MDGA1Q8NFP4 955 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 OR4K2Q8NGD2 314 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 RHEBL1Q8TAI7 183 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 PRICKLE1Q96MT3 831 aaPredicted RBP9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 NSUN5Q96P11 429 aaKnown RBP9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 TRAPPC9Q96Q05 1148 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 PSKH2Q96QS6 385 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 TSC22D3Q99576 134 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 TTPALQ9BTX7 342 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 SLC25A23Q9BV35 468 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 TTLL2Q9BWV7 592 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 PCDHAC1Q9H158 963 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 PIDD1Q9HB75 910 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 MID1IP1Q9NPA3 183 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 INTS10Q9NVR2 710 aaKnown RBP9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 NLE1Q9NVX2 485 aaPredicted RBP9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 EPS15L1Q9UBC2 864 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 SUCOQ9UBS9 1254 aaKnown RBP9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 UBA2Q9UBT2 640 aaPredicted RBP9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 SRRDQ9UH36 339 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 SARDHQ9UL12 918 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 LRFN2Q9ULH4 789 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 FAM50BQ9Y247 325 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 PTGDR2Q9Y5Y4 395 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 DENND4CQ5VZ89 1909 aa9.28□□□□□ -0.92
UBLCP1-201ENST00000296786 MKI67P46013 3256 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms