RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ZNF358Q9NW07 568 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 SLC27A6Q9Y2P4 619 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 MYO9BQ13459 2157 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 DOCK8Q8NF50 2099 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 HEPACAM2A8MVW5 462 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 NFATC1O95644 943 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 DGKGP49619 791 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 RBM20Q5T481 1227 aaKnown RBP15.54■□□□□ 0.08
LSM6-201ENST00000296581 C1QTNF12Q5T7M4 302 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 RAPH1Q70E73 1250 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 OTOAQ7RTW8 1153 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 SPATA21Q7Z572 469 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 NUDCD3Q8IVD9 361 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 ETFBKMTQ8IXQ9 262 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 TDHQ8IZJ6 230 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 FAM83CQ9BQN1 747 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 IL17CQ9P0M4 197 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 CORO1CQ9ULV4 474 aaPredicted RBP15.54■□□□□ 0.08
LSM6-201ENST00000296581 USP15Q9Y4E8 981 aaPredicted RBP15.54■□□□□ 0.08
LSM6-201ENST00000296581 SCN8AQ9UQD0 1980 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 WASH3PC4AMC7 463 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 STX7O15400 261 aaKnown RBP15.54■□□□□ 0.08
LSM6-201ENST00000296581 SMNDC1O75940 238 aaKnown RBP eCLIP15.54■□□□□ 0.08
LSM6-201ENST00000296581 POP4O95707 220 aaKnown RBP15.54■□□□□ 0.08
LSM6-201ENST00000296581 ALPIP09923 528 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 ARSAP15289 507 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 CTPS1P17812 591 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 SAT1P21673 171 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 HMGCLP35914 325 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 STC1P52823 247 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 GAB4Q2WGN9 574 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 DPY19L3Q6ZPD9 716 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 SDCCAG8Q86SQ7 713 aaPredicted RBP15.54■□□□□ 0.08
LSM6-201ENST00000296581 C12orf40Q86WS4 652 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 ZSWIM9Q86XI8 627 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 PNPLA1Q8N8W4 532 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 E2F7Q96AV8 911 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 INTS10Q9NVR2 710 aaKnown RBP15.54■□□□□ 0.08
LSM6-201ENST00000296581 FKBPLQ9UIM3 349 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 CDH7Q9ULB5 785 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 ACOT9Q9Y305 439 aa15.54■□□□□ 0.08
LSM6-201ENST00000296581 CAPN8A6NHC0 703 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 TULP3O75386 442 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 ASLP04424 464 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 PYGLP06737 847 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 FESP07332 822 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 HOXB8P17481 243 aaPredicted RBP15.53■□□□□ 0.08
LSM6-201ENST00000296581 PCLAFQ15004 111 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 CDKN3Q16667 212 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 FASTKD1Q53R41 847 aaKnown RBP15.53■□□□□ 0.08
LSM6-201ENST00000296581 HECTD2Q5U5R9 776 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 CCDC121Q6ZUS5 278 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 LYSMD3Q7Z3D4 306 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 CENPLQ8N0S6 344 aaPredicted RBP15.53■□□□□ 0.08
LSM6-201ENST00000296581 CCDC63Q8NA47 563 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 FRS2Q8WU20 508 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 EID2BQ96D98 161 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 TSPAN17Q96FV3 270 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 ZNF641Q96N77 438 aaPredicted RBP15.53■□□□□ 0.08
LSM6-201ENST00000296581 LYSMD1Q96S90 227 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 TCF12Q99081 682 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 NDNQ99608 321 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 OLFM1Q99784 485 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 ZNF106Q9H2Y7 1883 aaKnown RBP15.53■□□□□ 0.08
LSM6-201ENST00000296581 SUV39H2Q9H5I1 410 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 PPIL1Q9Y3C6 166 aa15.53■□□□□ 0.08
LSM6-201ENST00000296581 A0A087X1B8 175 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 AHCYL1O43865 530 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 SLC4A1P02730 911 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 SRPRAP08240 638 aaKnown RBP15.52■□□□□ 0.08
LSM6-201ENST00000296581 BMP1P13497 986 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 ALDH3A1P30838 453 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 PGGT1BP53609 377 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 SLC12A2P55011 1212 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 IRX4P78413 519 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 RAD51Q06609 339 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 ADAM15Q13444 863 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 PDGFRLQ15198 375 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 ATG16L1Q676U5 607 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 Q6ZVU0 165 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 ANKS4BQ8N8V4 417 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 OR2A12Q8NGT7 310 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 ZFYVE19Q96K21 471 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 TSSK1BQ9BXA7 367 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 GPR63Q9BZJ6 419 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 EBF2Q9HAK2 575 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 THG1LQ9NWX6 298 aaKnown RBP15.52■□□□□ 0.08
LSM6-201ENST00000296581 COPG2Q9UBF2 871 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 VWA7Q9Y334 891 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 COL4A3Q01955 1670 aa15.52■□□□□ 0.08
LSM6-201ENST00000296581 MGRN1O60291 552 aa15.52■□□□□ 0.07
LSM6-201ENST00000296581 WISP3O95389 354 aaPredicted RBP15.52■□□□□ 0.07
LSM6-201ENST00000296581 APOA4P06727 396 aa15.52■□□□□ 0.07
LSM6-201ENST00000296581 HNF1BP35680 557 aa15.52■□□□□ 0.07
LSM6-201ENST00000296581 XIAPP98170 497 aa15.52■□□□□ 0.07
LSM6-201ENST00000296581 PEX6Q13608 980 aa15.52■□□□□ 0.07
LSM6-201ENST00000296581 ZNF460Q14592 562 aa15.52■□□□□ 0.07
LSM6-201ENST00000296581 CHI3L2Q15782 390 aa15.52■□□□□ 0.07
LSM6-201ENST00000296581 FAM45BPQ6NSW5 357 aa15.52■□□□□ 0.07
LSM6-201ENST00000296581 FAM45AQ8TCE6 357 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 602.2 ms