RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 TM7SF2O76062 418 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 CXCR3P49682 368 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 SLC1A5Q15758 541 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 SPESP1Q6UW49 350 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 UBE2R2Q712K3 238 aaPredicted RBP12.78□□□□□ -0.36
PTCD1-201ENST00000292478 GATAD2AQ86YP4 633 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 RASAL3Q86YV0 1011 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 ST13P5Q8NFI4 369 aaPredicted RBP12.78□□□□□ -0.36
PTCD1-201ENST00000292478 A0A0J9YYE9 177 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 H7C0S8 307 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 PQLC1Q8N2U9 271 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 OR7A2PQ8NGA2 310 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 HSD3B7Q9H2F3 369 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 CLK4Q9HAZ1 481 aaKnown RBP12.78□□□□□ -0.36
PTCD1-201ENST00000292478 PCDH12Q9NPG4 1184 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 XPNPEP1Q9NQW7 623 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 EVA1BQ9NVM1 165 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 MSRAQ9UJ68 235 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 GLYATL1P3A0A0U1RQE8 302 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 CCDC189A1A4V9 331 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 GLUD1P00367 558 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 NTRK1P04629 796 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 SLC35G4P0C7Q5 338 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 EPORP19235 508 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 HTR1BP28222 390 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 FLT3LGP49771 235 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 FOLH1Q04609 750 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 USP4Q13107 963 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 GALNT18Q6P9A2 607 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 FAM151BQ6UXP7 276 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 VN1R5Q7Z5H4 357 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 COLGALT2Q8IYK4 626 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 ENKURQ8TC29 256 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 TEFMQ96QE5 360 aaKnown RBP12.78□□□□□ -0.36
PTCD1-201ENST00000292478 NUAK2Q9H093 628 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 LINC00854A0A1B0GVQ3 168 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 TREHO43280 583 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 PIRTP0C851 137 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 GABRR2P28476 465 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 SLC7A2P52569 658 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 CCL23P55773 120 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 DUSP4Q13115 394 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 TAF5Q15542 800 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 ASTE1Q2TB18 679 aaPredicted RBP12.78□□□□□ -0.36
PTCD1-201ENST00000292478 ZNF513Q8N8E2 541 aaPredicted RBP12.78□□□□□ -0.36
PTCD1-201ENST00000292478 PHF10Q8WUB8 498 aaKnown RBP12.78□□□□□ -0.36
PTCD1-201ENST00000292478 SPRTNQ9H040 489 aaPredicted RBP12.78□□□□□ -0.36
PTCD1-201ENST00000292478 GOLGA2P5Q9HBQ8 144 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 APOBEC3GQ9HC16 384 aaKnown RBP12.78□□□□□ -0.36
PTCD1-201ENST00000292478 S100A14Q9HCY8 104 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 ELFN1P0C7U0 828 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 SPAM1P38567 509 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 GNPDA1P46926 289 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 UGT2B15P54855 530 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 ABRQ12979 859 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 AP5B1Q2VPB7 878 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 CAPN13Q6MZZ7 669 aaPredicted RBP12.78□□□□□ -0.36
PTCD1-201ENST00000292478 NEK5Q6P3R8 708 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 OTOP3Q7RTS5 596 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 CPSF7Q8N684 471 aaKnown RBP12.78□□□□□ -0.36
PTCD1-201ENST00000292478 LRRN4Q8WUT4 740 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 SLCO2A1Q92959 643 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 EXOC2Q96KP1 924 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 FANCEQ9HB96 536 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 SLC27A6Q9Y2P4 619 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 RAI2Q9Y5P3 530 aa12.78□□□□□ -0.36
PTCD1-201ENST00000292478 M0R2N6 131 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 ACSL4O60488 711 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 TCEA3O75764 348 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 EOMESO95936 686 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 IL10RBQ08334 325 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 TAPT1Q6NXT6 567 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 ZNF567Q8N184 647 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 SPATA6LQ8N4H0 392 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 LEMD2Q8NC56 503 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 BPIFB6Q8NFQ5 453 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 ANKRD49Q8WVL7 239 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 SPOCK2Q92563 424 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 PLD4Q96BZ4 506 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 MCRS1Q96EZ8 462 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 SLC47A1Q96FL8 570 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 VPS35Q96QK1 796 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 FBXW11Q9UKB1 542 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 AP4B1Q9Y6B7 739 aa12.77□□□□□ -0.36
PTCD1-201ENST00000292478 COL14A1Q05707 1796 aaKnown RBP12.77□□□□□ -0.36
PTCD1-201ENST00000292478 IRGMA1A4Y4 181 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 MOXD2PA6NHM9 499 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 SLC22A2O15244 555 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 MSI1O43347 362 aaKnown RBP12.77□□□□□ -0.37
PTCD1-201ENST00000292478 SH3BGRLO75368 114 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 OR6A2O95222 327 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 SLC25A14O95258 325 aaPredicted RBP12.77□□□□□ -0.37
PTCD1-201ENST00000292478 NR2F1P10589 423 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 MPSTP25325 297 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 ASMTP46597 345 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 IDH2P48735 452 aaKnown RBP12.77□□□□□ -0.37
PTCD1-201ENST00000292478 DAOAP59103 153 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 LILRA4P59901 499 aa12.77□□□□□ -0.37
PTCD1-201ENST00000292478 HNRNPDQ14103 355 aaKnown RBP12.77□□□□□ -0.37
PTCD1-201ENST00000292478 ANKS1BQ7Z6G8 1248 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms