RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.7■□□□□ 0.1
USP43-201ENST00000285199 OR2T12Q8NG77 320 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 GRIN3AQ8TCU5 1115 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 TOR3AQ9H497 397 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 MOSPD1Q9UJG1 213 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 DUSP12Q9UNI6 340 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 A0A1W2PQ67 120 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 C5orf58C9J3I9 102 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 PSMD11O00231 422 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 TOMM70O94826 608 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 BEX3Q00994 111 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 RHDQ02161 417 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 OVOS1Q6IE37 1185 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 SPNS2Q8IVW8 549 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 OR10A6Q8NH74 314 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 MRIQ9BWK5 157 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 GBA2Q9HCG7 927 aaPredicted RBP15.7■□□□□ 0.1
USP43-201ENST00000285199 CATSPERZQ9NTU4 200 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 MAFBQ9Y5Q3 323 aaPredicted RBP15.7■□□□□ 0.1
USP43-201ENST00000285199 NFASCO94856 1347 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 CLDN25C9JDP6 229 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 IDH3BO43837 385 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 TFAP2AP05549 437 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 S100A3P33764 101 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 SOX6P35712 828 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 SLC26A2P50443 739 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 ADHFE1Q8IWW8 467 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 TBC1D21Q8IYX1 336 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 SMYD1Q8NB12 490 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 RDH11Q8TC12 318 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 ISOC1Q96CN7 298 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 TEKT5Q96M29 485 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 ZBTB26Q9HCK0 441 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 PIGVQ9NUD9 493 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 SLC38A7Q9NVC3 462 aa15.7■□□□□ 0.1
USP43-201ENST00000285199 HNRNPCL2B2RXH8 293 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 BCAS2O75934 225 aaPredicted RBP15.69■□□□□ 0.1
USP43-201ENST00000285199 ELK4P28324 431 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 DSC2Q02487 901 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 ZNF846Q147U1 533 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 SPDYE7PQ495Y7 208 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 DGKKQ5KSL6 1271 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 FAM117BQ6P1L5 589 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 STRADAQ7RTN6 431 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 UNC93AQ86WB7 457 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 CFAP52Q8N1V2 620 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 GPRC5AQ8NFJ5 357 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 REXO5Q96IC2 774 aaKnown RBP15.69■□□□□ 0.1
USP43-201ENST00000285199 PDZD7Q9H5P4 517 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 CNTN6Q9UQ52 1028 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 K7EPI3 171 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 CDK4P11802 303 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 CLCN5P51795 746 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 ZBED5Q49AG3 693 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 FGD3Q5JSP0 725 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 AARS2Q5JTZ9 985 aaKnown RBP15.69■□□□□ 0.1
USP43-201ENST00000285199 ZBTB8BQ8NAP8 495 aaPredicted RBP15.69■□□□□ 0.1
USP43-201ENST00000285199 AKTIPQ9H8T0 292 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 OGDHLQ9ULD0 1010 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 NUMBLQ9Y6R0 609 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 MYO5AQ9Y4I1 1855 aaKnown RBP15.69■□□□□ 0.1
USP43-201ENST00000285199 ZNF197O14709 1029 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 SNAP29O95721 258 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 ANXA6P08133 673 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 CNPP09543 421 aaKnown RBP15.69■□□□□ 0.1
USP43-201ENST00000285199 CDK9P50750 372 aaKnown RBP15.69■□□□□ 0.1
USP43-201ENST00000285199 NDST2P52849 883 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 TBX4P57082 545 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 IL2P60568 153 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 BNIP2Q12982 314 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 PTPRCAPQ14761 206 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 ARMCX4Q5H9R4 360 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 ANKRD13AQ8IZ07 590 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 GPR20Q99678 358 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 RHOBTB2Q9BYZ6 727 aa15.69■□□□□ 0.1
USP43-201ENST00000285199 SAMHD1Q9Y3Z3 626 aaKnown RBP15.69■□□□□ 0.1
USP43-201ENST00000285199 ARID1BQ8NFD5 2236 aaPredicted RBP15.69■□□□□ 0.1
USP43-201ENST00000285199 CCNKO75909 580 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 ODC1P11926 461 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 IL12AP29459 219 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 PRDX6P30041 224 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 FMO3P31513 532 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 BRCC3P46736 316 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 TAB1Q15750 504 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 C16orf59Q7L2K0 433 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 DEFB132Q7Z7B7 95 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 APOL4Q9BPW4 351 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 TRIM62Q9BVG3 475 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 GPC6Q9Y625 555 aaPredicted RBP15.68■□□□□ 0.1
USP43-201ENST00000285199 CAPN14A8MX76 684 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 H3BN98 237 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 PGLSO95336 258 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 ANGPTL1O95841 491 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 OR4Q2P0C623 313 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 CAPGP40121 348 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 THPOP40225 353 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 DGKQP52824 942 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 SLC16A1P53985 500 aa15.68■□□□□ 0.1
USP43-201ENST00000285199 BOP1Q14137 746 aaKnown RBP15.68■□□□□ 0.1
USP43-201ENST00000285199 DPYSL2Q16555 572 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms