RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 MED10Q9BTT4 135 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 TKTL2Q9H0I9 626 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 MUC13Q9H3R2 512 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 ATAD3AQ9NVI7 634 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 SMOXQ9NWM0 555 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 FBXO5Q9UKT4 447 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 IPPQ9Y573 584 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 SPTBN5Q9NRC6 3674 aaKnown RBP10.39□□□□□ -0.75
SKA1-201ENST00000285116 NUP205Q92621 2012 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 SYNJ2BP-COX16A0A087WUM0 186 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.39□□□□□ -0.75
SKA1-201ENST00000285116 A8MT66 165 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 WASH4PA8MWX3 477 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 MAFKO60675 156 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 LTA4HP09960 611 aaKnown RBP10.39□□□□□ -0.75
SKA1-201ENST00000285116 HSPA8P11142 646 aaKnown RBP10.39□□□□□ -0.75
SKA1-201ENST00000285116 HOXB8P17481 243 aaPredicted RBP10.39□□□□□ -0.75
SKA1-201ENST00000285116 CD247P20963 164 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 GLRBP48167 497 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 FOXM1Q08050 763 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 GRSF1Q12849 480 aaKnown RBP eCLIP10.39□□□□□ -0.75
SKA1-201ENST00000285116 MAP7D1Q3KQU3 841 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 BTBD8Q5XKL5 378 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 TMEM26Q6ZUK4 368 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 LARP4Q71RC2 724 aaKnown RBP eCLIP10.39□□□□□ -0.75
SKA1-201ENST00000285116 OTOP3Q7RTS5 596 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 C2orf69Q8N8R5 385 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 OR6J1Q8NGC5 347 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 MARK4Q96L34 752 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 TUBA1CQ9BQE3 449 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 C1orf50Q9BV19 199 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 ADI1Q9BV57 179 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 UPF3AQ9H1J1 476 aaKnown RBP10.39□□□□□ -0.75
SKA1-201ENST00000285116 COX16Q9P0S2 106 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 SEPT3Q9UH03 358 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 TSC22D4Q9Y3Q8 395 aa10.39□□□□□ -0.75
SKA1-201ENST00000285116 PLXNA3P51805 1871 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 SRP72O76094 671 aaKnown RBP10.38□□□□□ -0.75
SKA1-201ENST00000285116 HSD17B1P14061 328 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 IMPDH1P20839 514 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 PAX3P23760 479 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 CRYBB1P53674 252 aaPredicted RBP10.38□□□□□ -0.75
SKA1-201ENST00000285116 MERTKQ12866 999 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 SMAD1Q15797 465 aaKnown RBP10.38□□□□□ -0.75
SKA1-201ENST00000285116 CCL14Q16627 93 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 ESRP1Q6NXG1 681 aaKnown RBP10.38□□□□□ -0.75
SKA1-201ENST00000285116 GPRIN1Q7Z2K8 1008 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 CUZD1Q86UP6 607 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 DENND6AQ8IWF6 608 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 ATPAF2Q8N5M1 289 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 PDPRQ8NCN5 879 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 TSPEARQ8WU66 669 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 TANKQ92844 425 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 ELMO2Q96JJ3 720 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 HOPXQ9BPY8 73 aaPredicted RBP10.38□□□□□ -0.75
SKA1-201ENST00000285116 APOL2Q9BQE5 337 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 ABHD16BQ9H3Z7 469 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 GSTO2Q9H4Y5 243 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 POLR1BQ9H9Y6 1135 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 CCM2LQ9NUG4 571 aaPredicted RBP10.38□□□□□ -0.75
SKA1-201ENST00000285116 CROTQ9UKG9 612 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 PIN4Q9Y237 131 aaKnown RBP10.38□□□□□ -0.75
SKA1-201ENST00000285116 MTF2Q9Y483 593 aaPredicted RBP10.38□□□□□ -0.75
SKA1-201ENST00000285116 CHD7Q9P2D1 2997 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 PRORSD1PA6NEY8 169 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 TMEM233B4DJY2 109 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 HAS3O00219 553 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 KPNA4O00629 521 aaPredicted RBP10.38□□□□□ -0.75
SKA1-201ENST00000285116 TNPO2O14787 897 aaKnown RBP10.38□□□□□ -0.75
SKA1-201ENST00000285116 NRP2O60462 931 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 TIPRLO75663 272 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 FGF4P08620 206 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 GNAO1P09471 354 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 HOXC8P31273 242 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 AVPR1AP37288 418 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 ATP6V0D1P61421 351 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 NFATC3Q12968 1075 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 BNIP2Q12982 314 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 NEPROQ6NW34 567 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 SLC15A4Q8N697 577 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 CCNYL1Q8N7R7 359 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 ARRDC4Q8NCT1 418 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 OR2T34Q8NGX1 318 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 OR2T3Q8NH03 318 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 ACDQ96AP0 544 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 SLC45A3Q96JT2 553 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 TRIM15Q9C019 465 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 UNKQ9C0B0 810 aaKnown RBP10.38□□□□□ -0.75
SKA1-201ENST00000285116 RNF39Q9H2S5 420 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 CATSPERBQ9H7T0 1116 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 CD320Q9NPF0 282 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 RIC8BQ9NVN3 520 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 TMEM45AQ9NWC5 275 aa10.38□□□□□ -0.75
SKA1-201ENST00000285116 SCHIP1Q9P0W5 487 aaPredicted RBP10.38□□□□□ -0.75
SKA1-201ENST00000285116 MAGED2Q9UNF1 606 aaPredicted RBP10.38□□□□□ -0.75
SKA1-201ENST00000285116 J3QRK9 145 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 MRASO14807 208 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 MATN4O95460 622 aa10.37□□□□□ -0.75
SKA1-201ENST00000285116 F7P08709 466 aaPredicted RBP10.37□□□□□ -0.75
SKA1-201ENST00000285116 CCNA2P20248 432 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms