RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TNFRSF12AQ9NP84 129 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 IQCF5A8MTL0 148 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 SIX3O95343 332 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-201ENST00000279247 RDH11Q8TC12 318 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 CCDC124Q96CT7 223 aaKnown RBP17.93■□□□□ 0.46
CAPN1-201ENST00000279247 CEP295NLQ96MC4 621 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 SLC46A2Q9BY10 475 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 GPR63Q9BZJ6 419 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 IL23AQ9NPF7 189 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 DNAJC28Q9NX36 388 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 GALPQ9UBC7 116 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 TRAFD1O14545 582 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-201ENST00000279247 GREM1O60565 184 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 ATP5F1P24539 256 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-201ENST00000279247 CTNNB1P35222 781 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 CTSOP43234 321 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-201ENST00000279247 STC1P52823 247 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 PTPRNQ16849 979 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 GEN1Q17RS7 908 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 RALGPS1Q5JS13 557 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 LRRC73Q5JTD7 316 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 EPGNQ6UW88 154 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 ADGRE3Q9BY15 652 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 LHX3Q9UBR4 397 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 HDAC3O15379 428 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 LPOP22079 712 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-201ENST00000279247 ZNF140P52738 457 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-201ENST00000279247 TNK2Q07912 1038 aa17.93■□□□□ 0.46
CAPN1-201ENST00000279247 LSM12Q3MHD2 195 aaKnown RBP17.93■□□□□ 0.46
CAPN1-201ENST00000279247 KHDC1Q4VXA5 237 aaKnown RBP17.93■□□□□ 0.46
CAPN1-201ENST00000279247 FAM109BQ6ICB4 259 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-201ENST00000279247 UBXN8O00124 270 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 MATN2O00339 956 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 ADH1AP07327 375 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 ITGB6P18564 788 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 WEE1P30291 646 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 KPNA2P52292 529 aaKnown RBP17.92■□□□□ 0.46
CAPN1-201ENST00000279247 NTHL1P78549 312 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 LMAN2Q12907 356 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 PRKAA1Q13131 559 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 CUL3Q13618 768 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 PPM1LQ5SGD2 360 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 CLEC6AQ6EIG7 209 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 PAQR3Q6TCH7 311 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 LYSMD3Q7Z3D4 306 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 ELMOD1Q8N336 334 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 GCNAQ96QF7 691 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 ABCG8Q9H221 673 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 ASAH2Q9NR71 780 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.92■□□□□ 0.46
CAPN1-201ENST00000279247 HSFX1Q9UBD0 423 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 ATP6AP2A0A1C7CYW4 349 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 H3BMM5 538 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 NIPSNAP2O75323 286 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 ATP6AP2O75787 350 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 IPO13O94829 963 aaKnown RBP17.92■□□□□ 0.46
CAPN1-201ENST00000279247 SORBS2O94875 1100 aaKnown RBP17.92■□□□□ 0.46
CAPN1-201ENST00000279247 RPSAP08865 295 aaKnown RBP17.92■□□□□ 0.46
CAPN1-201ENST00000279247 PPP3CCP48454 512 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 NSUN2Q08J23 767 aaKnown RBP eCLIP17.92■□□□□ 0.46
CAPN1-201ENST00000279247 ASPHQ12797 758 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 RIPK1Q13546 671 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 PFKFB4Q16877 469 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 FAM45BPQ6NSW5 357 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 FAM45AQ8TCE6 357 aa17.92■□□□□ 0.46
CAPN1-201ENST00000279247 CCDC97Q96F63 343 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-201ENST00000279247 NLE1Q9NVX2 485 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-201ENST00000279247 PPP6CO00743 305 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 GRID2O43424 1007 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 LILRB3O75022 631 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 ARHGEF15O94989 841 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 FPGSQ05932 587 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 RFTN1Q14699 578 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-201ENST00000279247 CBX2Q14781 532 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-201ENST00000279247 TAF1AQ15573 450 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-201ENST00000279247 ALG1LQ6GMV1 187 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 FAM151BQ6UXP7 276 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 ISCA2Q86U28 154 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 ESAMQ96AP7 390 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 GPR21Q99679 349 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 ABCB8Q9NUT2 735 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 UTP6Q9NYH9 597 aaKnown RBP17.91■□□□□ 0.46
CAPN1-201ENST00000279247 TRAV19A0A0A6YYK7 116 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 LEFTY2O00292 366 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 PER2O15055 1255 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 PDE5AO76074 875 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 GLUD1P00367 558 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 CHRM3P20309 590 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 TMEM240Q5SV17 173 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 NCEH1Q6PIU2 408 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 HIPK4Q8NE63 616 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 UBXN10Q96LJ8 280 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 CERS4Q9HA82 394 aa17.91■□□□□ 0.46
CAPN1-201ENST00000279247 TLL1O43897 1013 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 HNRNPCL1O60812 293 aaKnown RBP17.9■□□□□ 0.46
CAPN1-201ENST00000279247 PEX11AO75192 247 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 H2AFYO75367 372 aaKnown RBP17.9■□□□□ 0.46
CAPN1-201ENST00000279247 ANP32DO95626 131 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 GFAPP14136 432 aa17.9■□□□□ 0.46
CAPN1-201ENST00000279247 CDC25CP30307 473 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms