RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 ARL8BQ9NVJ2 186 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 CACNG4Q9UBN1 327 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 PADI3Q9ULW8 664 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.46□□□□□ -0.57
USP53-201ENST00000274030 SLC22A3O75751 556 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 GLUD1P00367 558 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 CCNYL3P0C7X3 344 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 BMP7P18075 431 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 HNRNPH3P31942 346 aaKnown RBP11.46□□□□□ -0.57
USP53-201ENST00000274030 MAPKAPK2P49137 400 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 RTP1P59025 263 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 DMPKQ09013 629 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 RALGDSQ12967 914 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 RFX4Q33E94 735 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 GPR107Q5VW38 600 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 ABRAXAS1Q6UWZ7 409 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 RALGPS2Q86X27 583 aaPredicted RBP11.46□□□□□ -0.57
USP53-201ENST00000274030 PROSER1Q86XN7 944 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 VANGL1Q8TAA9 524 aaPredicted RBP11.46□□□□□ -0.57
USP53-201ENST00000274030 NXNL1Q96CM4 212 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 NR2E3Q9Y5X4 410 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 LRRIQ1Q96JM4 1722 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 LRCH4O75427 683 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 TIPRLO75663 272 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 JAK1P23458 1154 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 SLC5A3P53794 718 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 MANFP55145 182 aaKnown RBP11.46□□□□□ -0.57
USP53-201ENST00000274030 PCBP1Q15365 356 aaKnown RBP eCLIP11.46□□□□□ -0.57
USP53-201ENST00000274030 BRMS1LQ5PSV4 323 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 POMZP3Q6PJE2 187 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 OTOP2Q7RTS6 562 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 ADGRG2Q8IZP9 1017 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 SCAIQ8N9R8 606 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 ZNF398Q8TD17 642 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 SPOCK2Q92563 424 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 CLPTM1LQ96KA5 538 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 GINS4Q9BRT9 223 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 HMG20AQ9NP66 347 aa11.46□□□□□ -0.57
USP53-201ENST00000274030 BIRC5O15392 142 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 DDX3YO15523 660 aaKnown RBP11.46□□□□□ -0.58
USP53-201ENST00000274030 EDF1O60869 148 aaKnown RBP11.46□□□□□ -0.58
USP53-201ENST00000274030 BPGMP07738 259 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 ETS2P15036 469 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 DSC2Q02487 901 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 VWA5B1Q5TIE3 1220 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 BROXQ5VW32 411 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 LCLAT1Q6UWP7 414 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 TMPRSS11BQ86T26 416 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 C1orf127Q8N9H9 656 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 PPCDCQ96CD2 204 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 RHOJQ9H4E5 214 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 RAB23Q9ULC3 237 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 BTBD3Q9Y2F9 522 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 STON1Q9Y6Q2 735 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 A0A0J9YYE9 177 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 GPR25O00155 361 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 AP3D1O14617 1153 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 CILPO75339 1184 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 SNUPNO95149 360 aaKnown RBP11.46□□□□□ -0.58
USP53-201ENST00000274030 SLC6A2P23975 617 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 ADSSP30520 456 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 HECTD2Q5U5R9 776 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.46□□□□□ -0.58
USP53-201ENST00000274030 PLD5Q8N7P1 536 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 OR8D1Q8WZ84 308 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 PLEKHG4BQ96PX9 1271 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 ATG10Q9H0Y0 220 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 SGK2Q9HBY8 427 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 AP3M1Q9Y2T2 418 aa11.46□□□□□ -0.58
USP53-201ENST00000274030 CCDC189A1A4V9 331 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 CAPN15O75808 1086 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 GSTT1P30711 240 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 MPP1Q00013 466 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 MED22Q15528 200 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 TIMM50Q3ZCQ8 353 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 LPCAT4Q643R3 524 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 TXNDC11Q6PKC3 985 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 B3GNT6Q6ZMB0 384 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 PSMA8Q8TAA3 256 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 TRIT1Q9H3H1 467 aaKnown RBP11.45□□□□□ -0.58
USP53-201ENST00000274030 KIAA1522Q9P206 1035 aaPredicted RBP11.45□□□□□ -0.58
USP53-201ENST00000274030 RIMS1Q86UR5 1692 aaKnown RBP11.45□□□□□ -0.58
USP53-201ENST00000274030 OR6C75A6NL08 312 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 BTBD19C9JJ37 291 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 B4GALT4O60513 344 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 FKTNO75072 461 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 KRT33AO76009 404 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 MT-ND1P03886 318 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 C4BPAP04003 597 aaKnown RBP11.45□□□□□ -0.58
USP53-201ENST00000274030 IDO1P14902 403 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 RCVRNP35243 200 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 SSR2P43308 183 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 RGS1Q08116 209 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 SLC1A5Q15758 541 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 AKIRIN2Q53H80 203 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 FAM171BQ6P995 826 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 GET4Q7L5D6 327 aaPredicted RBP11.45□□□□□ -0.58
USP53-201ENST00000274030 STRADAQ7RTN6 431 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 TNFRSF25Q93038 417 aa11.45□□□□□ -0.58
USP53-201ENST00000274030 MFSD3Q96ES6 412 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms