RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 RPA4Q13156 261 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 SNAPC1Q16533 368 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 KCTD19Q17RG1 926 aaPredicted RBP11.16□□□□□ -0.62
CHFR-201ENST00000266880 GARNL3Q5VVW2 1013 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 ELP3Q9H9T3 547 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 ATP10AO60312 1499 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 TRDMT1O14717 391 aaKnown RBP11.16□□□□□ -0.62
CHFR-201ENST00000266880 CCNFP41002 786 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 FXR2P51116 673 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHFR-201ENST00000266880 TBX2Q13207 712 aaPredicted RBP11.16□□□□□ -0.62
CHFR-201ENST00000266880 ZMYND11Q15326 602 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 ZNF425Q6IV72 752 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 OR2L8Q8NGY9 312 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 NEDD1Q8NHV4 660 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 IGDCC4Q8TDY8 1250 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 QRFPRQ96P65 431 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 CCDC177Q9NQR7 707 aaPredicted RBP11.16□□□□□ -0.62
CHFR-201ENST00000266880 ANXA2P2A6NMY6 339 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 RIIAD1A6NNX1 92 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 TBX1O43435 398 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 SLC22A3O75751 556 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 GABBR2O75899 941 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 CRYZL1O95825 349 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 ANXA2P07355 339 aaKnown RBP11.16□□□□□ -0.62
CHFR-201ENST00000266880 GLRA2P23416 452 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 ECHS1P30084 290 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 PPM1AP35813 382 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 MYL6P60660 151 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 WSCD2Q2TBF2 565 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 PAN2Q504Q3 1202 aaKnown RBP11.16□□□□□ -0.62
CHFR-201ENST00000266880 PPM1LQ5SGD2 360 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 MARC1Q5VT66 337 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 SPPL2CQ8IUH8 684 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 ELMOD2Q8IZ81 293 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 MCOLN2Q8IZK6 566 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 NSMCE3Q96MG7 304 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 PPM1MQ96MI6 270 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 ZNF717Q9BY31 904 aaPredicted RBP11.16□□□□□ -0.62
CHFR-201ENST00000266880 SNTG1Q9NSN8 517 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 A0A088AWK7 358 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 BHMG1C9JSJ3 638 aaPredicted RBP11.16□□□□□ -0.62
CHFR-201ENST00000266880 CHST10O43529 356 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 NAT2P11245 290 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 ZNF10P21506 573 aaPredicted RBP11.16□□□□□ -0.62
CHFR-201ENST00000266880 PTPN3P26045 913 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 PFKPQ01813 784 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 SGCGQ13326 291 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 ADNP2Q6IQ32 1131 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 APOBEC3FQ8IUX4 373 aaKnown RBP11.16□□□□□ -0.62
CHFR-201ENST00000266880 OR10H4Q8NGA5 316 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 OR52K1Q8NGK4 314 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 PPP3R2Q96LZ3 170 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 ERVK-5Q9HDB9 667 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 BAG6P46379 1132 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 NAGLUP54802 743 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 NRG1Q02297 640 aaPredicted RBP11.16□□□□□ -0.62
CHFR-201ENST00000266880 PRKG2Q13237 762 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 SMARCD1Q96GM5 515 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 PRPF19Q9UMS4 504 aaKnown RBP11.16□□□□□ -0.62
CHFR-201ENST00000266880 OR6C70A6NIJ9 312 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 COQ9O75208 318 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 NDUFB10O96000 172 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 HGFP14210 728 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 PSMA1P25786 263 aaKnown RBP11.16□□□□□ -0.62
CHFR-201ENST00000266880 THPOP40225 353 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 C16orf59Q7L2K0 433 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 OR8K3Q8NH51 312 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 RAET1EQ8TD07 263 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 MRPL45Q9BRJ2 306 aaKnown RBP11.16□□□□□ -0.62
CHFR-201ENST00000266880 FAM86C2PA6NEL3 165 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 TKTL1P51854 596 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 BATFQ16520 125 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 QSOX2Q6ZRP7 698 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 GRIN3AQ8TCU5 1115 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 PRDM8Q9NQV8 689 aa11.16□□□□□ -0.62
CHFR-201ENST00000266880 NEPROQ6NW34 567 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 NPNTQ6UXI9 565 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 CHST15Q7LFX5 561 aaPredicted RBP11.15□□□□□ -0.62
CHFR-201ENST00000266880 OR10H5Q8NGA6 315 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 CNOT6Q9ULM6 557 aaKnown RBP11.15□□□□□ -0.62
CHFR-201ENST00000266880 CDK12Q9NYV4 1490 aaPredicted RBP11.15□□□□□ -0.62
CHFR-201ENST00000266880 PRR5-ARHGAP8B1AHC4 643 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 F9P00740 461 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 GSTT2BP0CG30 244 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 GADD45AP24522 165 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 TCF7P36402 384 aaPredicted RBP11.15□□□□□ -0.62
CHFR-201ENST00000266880 TBX4P57082 545 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 TSPAN5P62079 268 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 ARHGAP8P85298 464 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 VMACQ2NL98 169 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 KLHL35Q6PF15 583 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 OR52J3Q8NH60 311 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 SPATA20Q8TB22 786 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 SETD4Q9NVD3 440 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 SLC39A1Q9NY26 324 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 GMIPQ9P107 970 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 ISPDA4D126 451 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 OR1I1O60431 355 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 NDUFS2O75306 463 aa11.15□□□□□ -0.62
CHFR-201ENST00000266880 KCNA5P22460 613 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms