RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 PHF11Q9UIL8 331 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 PI4KAP42356 2102 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 FAM240BA0A1B0GVZ2 78 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 CYP2A7P20853 494 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 RPS12P25398 132 aaKnown RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 GPR15P49685 360 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 GALEQ14376 348 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 ARMC6Q6NXE6 501 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 BBS12Q6ZW61 710 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 BORCS6Q96GS4 357 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 KAZALD1Q96I82 304 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 PPP3R2Q96LZ3 170 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 YTHDF1Q9BYJ9 559 aaKnown RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 ZCCHC2Q9C0B9 1178 aaKnown RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 SLC22A4Q9H015 551 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 SSU72Q9NP77 194 aaKnown RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 MYOZ2Q9NPC6 264 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 COQ3Q9NZJ6 369 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 SUCOQ9UBS9 1254 aaKnown RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 PLK4O00444 970 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 ERBB2P04626 1255 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 KDELR1P24390 212 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 PLD1Q13393 1074 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 BMPR2Q13873 1038 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 GALNT3Q14435 633 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 FBXO47Q5MNV8 452 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 PROSER1Q86XN7 944 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 SLC4A11Q8NBS3 891 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 DNERQ8NFT8 737 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 GATA6Q92908 595 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 TPD52L3Q96J77 140 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 PANX3Q96QZ0 392 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 TRPC4Q9UBN4 977 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 ZNF70Q9UC06 446 aaPredicted RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 OGDHLQ9ULD0 1010 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 REXO2Q9Y3B8 237 aaKnown RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 A0A087X0B3 334 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 RAB19A4D1S5 217 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 OR6C70A6NIJ9 312 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 PRMT3O60678 531 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 STAU1O95793 577 aaKnown RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 CLTBP09497 229 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 MATN1P21941 496 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 CES1P23141 567 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 RORAP35398 523 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 GRIA4P48058 902 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 MAZP56270 477 aaKnown RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 MARC1Q5VT66 337 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 MZT2AQ6P582 158 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 PNMA5Q96PV4 448 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 SLITRK2Q9H156 845 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 ANKMY1Q9P2S6 941 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 SLC25A13Q9UJS0 675 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 SNX6Q9UNH7 406 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 B3GNT3Q9Y2A9 372 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 FGF10O15520 208 aaPredicted RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 CDC40O60508 579 aaKnown RBP eCLIP5.7□□□□□ -1.5
VCAN-201ENST00000265077 BST1Q10588 318 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 MAB21L1Q13394 359 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 MTX3Q5HYI7 312 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 ASRGL1Q7L266 308 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 SNX20Q7Z614 316 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 EMC1Q8N766 993 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 ZNF366Q8N895 744 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 PTCD2Q8WV60 388 aaKnown RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 COPS4Q9BT78 406 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 XPNPEP3Q9NQH7 507 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 CNOT11Q9UKZ1 510 aaKnown RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 DOCK10Q96BY6 2186 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 PRR5-ARHGAP8B1AHC4 643 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 PLOD3O60568 738 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 HNF1BP35680 557 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 FEN1P39748 380 aaKnown RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 ARHGAP8P85298 464 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 SMARCD1Q96GM5 515 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 CDHR5Q9HBB8 845 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 SMPD3Q9NY59 655 aaPredicted RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 H0Y858 1186 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 TRIM38O00635 465 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 B3GAT3O94766 335 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 ACO1P21399 889 aaKnown RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 ERP29P30040 261 aaKnown RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 ZNF143P52747 638 aaPredicted RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 RAB5BP61020 215 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 TBRG1Q3YBR2 411 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 CBWD6Q4V339 395 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 CBWD3Q5JTY5 395 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 CBWD5Q5RIA9 395 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 ZNF549Q6P9A3 640 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 TMEM126BQ8IUX1 230 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 TRIM48Q8IWZ4 208 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 RASGEF1CQ8N431 466 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 NPLOC4Q8TAT6 608 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 RPRD1AQ96P16 312 aaPredicted RBP5.7□□□□□ -1.5
VCAN-201ENST00000265077 LPIN3Q9BQK8 851 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 ZNF416Q9BWM5 594 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 NT5MQ9NPB1 228 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 ZNF451Q9Y4E5 1061 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 MPDZO75970 2070 aa5.7□□□□□ -1.5
VCAN-201ENST00000265077 RBAK-RBAKDNI3L0D1 243 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms