RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 SFT2D3Q587I9 215 aa11.68□□□□□ -0.54
DNMT3A-201ENST00000264709 LRTOMTQ8WZ04 291 aa11.68□□□□□ -0.54
DNMT3A-201ENST00000264709 FGFBP2Q9BYJ0 223 aa11.68□□□□□ -0.54
DNMT3A-201ENST00000264709 KCPQ6ZWJ8 1503 aa11.68□□□□□ -0.54
DNMT3A-201ENST00000264709 ITGA10O75578 1167 aa11.68□□□□□ -0.54
DNMT3A-201ENST00000264709 POLR2JP52435 117 aaKnown RBP11.68□□□□□ -0.54
DNMT3A-201ENST00000264709 LIPEQ05469 1076 aa11.68□□□□□ -0.54
DNMT3A-201ENST00000264709 ABRQ12979 859 aa11.68□□□□□ -0.54
DNMT3A-201ENST00000264709 REP15Q6BDI9 236 aa11.68□□□□□ -0.54
DNMT3A-201ENST00000264709 GPR180Q86V85 440 aa11.68□□□□□ -0.54
DNMT3A-201ENST00000264709 DCP1BQ8IZD4 617 aaKnown RBP11.68□□□□□ -0.54
DNMT3A-201ENST00000264709 ZFP42Q96MM3 310 aa11.68□□□□□ -0.54
DNMT3A-201ENST00000264709 DPYSL4O14531 572 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 HTRA2O43464 458 aaPredicted RBP11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 TMEM63AO94886 807 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 AXLP30530 894 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 GLUD2P49448 558 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 SPP2Q13103 211 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 NFE2Q16621 373 aaPredicted RBP11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 CCDC157Q569K6 752 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 EFCAB12Q6NXP0 572 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 UGT2A3Q6UWM9 527 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 SCUBE3Q8IX30 993 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 OAZ3Q9UMX2 235 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 MAGEB3O15480 346 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 SPATA2LQ8IUW3 424 aaPredicted RBP11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 SEMA4DQ92854 862 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 EBF4Q9BQW3 602 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 PIDD1Q9HB75 910 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 DSG3P32926 999 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 ATN1P54259 1190 aaPredicted RBP11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 GRIK2Q13002 908 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 DPYSL2Q16555 572 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 PTPN20Q4JDL3 420 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 ANKFN1Q8N957 763 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 APOL2Q9BQE5 337 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 WDR18Q9BV38 432 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 SLC39A8Q9C0K1 460 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 SYNDIG1Q9H7V2 258 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 RBM22Q9NW64 420 aaKnown RBP eCLIP11.67□□□□□ -0.543e-6■□□□□ 11.1
DNMT3A-201ENST00000264709 HSPE1-MOB4S4R3N1 261 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 F8W810 466 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 SUV39H1O43463 412 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 CDK4P11802 303 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 DAG1Q14118 895 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 RFTN2Q52LD8 501 aaPredicted RBP11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 NEK5Q6P3R8 708 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 CPB2Q96IY4 423 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 GRXCR2A6NFK2 248 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 ENO2P09104 434 aaPredicted RBP11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 ZNF7P17097 686 aaPredicted RBP11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 MPSTP25325 297 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 DALRD3Q5D0E6 543 aaKnown RBP11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 TRMT13Q9NUP7 481 aaKnown RBP11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 ST14Q9Y5Y6 855 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 TXNP10599 105 aaKnown RBP11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 RPS12P25398 132 aaKnown RBP11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 MCOLN3Q8TDD5 553 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 PHF10Q8WUB8 498 aaKnown RBP11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 ITCHQ96J02 903 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 GPR63Q9BZJ6 419 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 OPTCQ9UBM4 332 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 CNOT6Q9ULM6 557 aaKnown RBP11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 CACNA1SQ13698 1873 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 PDPK1O15530 556 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 DFNA5O60443 496 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 RHBDL3P58872 404 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 ATP13A4Q4VNC1 1196 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 TRPV3Q8NET8 790 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 LENG9Q96B70 501 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 FBXO44Q9H4M3 255 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 AHSPQ9NZD4 102 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 OR12D3Q9UGF7 316 aa11.67□□□□□ -0.54
DNMT3A-201ENST00000264709 CYBBP04839 570 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 UROSP10746 265 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 ERCC2P18074 760 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 ANKRD22Q5VYY1 191 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 C11orf74Q86VG3 221 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 ANKRD13BQ86YJ7 626 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 PTGR2Q8N8N7 351 aaPredicted RBP11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 SH3KBP1Q96B97 665 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 AGAP2Q99490 1192 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 HGH1Q9BTY7 390 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 DHRS4Q9BTZ2 278 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 ZIM2Q9NZV7 527 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 DERAQ9Y315 318 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 HOXD12P35452 270 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 TCF7P36402 384 aaPredicted RBP11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 LCN1P1Q5VSP4 162 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 C16orf62Q7Z3J2 963 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 RASAL3Q86YV0 1011 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 GAB3Q8WWW8 586 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 KCTD15Q96SI1 283 aaPredicted RBP11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 CHCHD6Q9BRQ6 235 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 APOL5Q9BWW9 433 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 VWA7Q9Y334 891 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 CAPN14A8MX76 684 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 EFCAB9A8MZ26 197 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 UPP2O95045 317 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 MAP3K6O95382 1288 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms