RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 CDYLQ9Y232 598 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 ASB1Q9Y576 335 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 NINQ8N4C6 2090 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 CROCCQ5TZA2 2017 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 CFAP73A6NFT4 308 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 KPNA3O00505 521 aaPredicted RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 LRATO95237 230 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 CYP11A1P05108 521 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 CALB2P22676 271 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 XPAP23025 273 aaPredicted RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 EEF1DP29692 281 aaKnown RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 HOXC8P31273 242 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 RPL14P50914 215 aaKnown RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 ERVFC1P60507 584 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 HNRNPDQ14103 355 aaKnown RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 TSNAXIP1Q2TAA8 658 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 TMCO4Q5TGY1 634 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 KCTD11Q693B1 232 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 UGT3A1Q6NUS8 523 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 IZUMO2Q6UXV1 221 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 RANBP10Q6VN20 620 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 KYAT3Q6YP21 454 aaKnown RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 SLC39A5Q6ZMH5 540 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 AMIGO2Q86SJ2 522 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 BADQ92934 168 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 LINGO1Q96FE5 620 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 CDKN2AIPNLQ96HQ2 116 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 LRCH3Q96II8 777 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 GCNAQ96QF7 691 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 ACAT2Q9BWD1 397 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 ATG10Q9H0Y0 220 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 UPF3AQ9H1J1 476 aaKnown RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 OSBPL2Q9H1P3 480 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 COPS7BQ9H9Q2 264 aaPredicted RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 HPS4Q9NQG7 708 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 VPS51Q9UID3 782 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 ITM2BQ9Y287 266 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 COQ6Q9Y2Z9 468 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 FAM186AA6NE01 2351 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 TTC28Q96AY4 2481 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 A8MT66 165 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 SMAPO00193 183 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 TGM5O43548 720 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 TLL1O43897 1013 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 MGRN1O60291 552 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 SMNDC1O75940 238 aaKnown RBP eCLIP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 FGF18O76093 207 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 RTN3O95197 1032 aaPredicted RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 GSRP00390 522 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 TUFMP49411 452 aaKnown RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 MCCD1P59942 119 aaPredicted RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 VPS26BQ4G0F5 336 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 DOK6Q6PKX4 331 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 GAREM2Q75VX8 874 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 SCG3Q8WXD2 468 aaKnown RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 FEM1CQ96JP0 617 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 UROC1Q96N76 676 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 PKMYT1Q99640 499 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 FRMD8Q9BZ67 464 aaPredicted RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 MRPL46Q9H2W6 279 aaKnown RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 PKP3Q9Y446 797 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 A0A0G2JMZ2 1700 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 C2orf81A6NN90 581 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 ATP6V1B1P15313 513 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 EN2P19622 333 aaPredicted RBP9.08□□□□□ -0.96
CKAP2-201ENST00000258607 CA5AP35218 305 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 TNK2Q07912 1038 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 SCAPQ12770 1279 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 KLF10Q13118 480 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 CPSF6Q16630 551 aaKnown RBP eCLIP9.08□□□□□ -0.96
CKAP2-201ENST00000258607 CUZD1Q86UP6 607 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 LCA5Q86VQ0 697 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 ADGRG2Q8IZP9 1017 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 PPFIBP2Q8ND30 876 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 SKA1Q96BD8 255 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 TDRD1Q9BXT4 1180 aaKnown RBP9.08□□□□□ -0.96
CKAP2-201ENST00000258607 CDH19Q9H159 772 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 EBF2Q9HAK2 575 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 DLGAP2Q9P1A6 1054 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 PNMA8BQ9ULN7 279 aaPredicted RBP9.08□□□□□ -0.96
CKAP2-201ENST00000258607 PIKFYVEQ9Y2I7 2098 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 CCDC189A1A4V9 331 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 OR6C75A6NL08 312 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 ENO4A6NNW6 628 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 H7C4K7 107 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 FFAR2O15552 330 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 DHRS4L1P0CG22 281 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 PCNAP12004 261 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 MLNP12872 115 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 HSPA7P48741 367 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 DIO3P55073 304 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 TEAD2Q15562 447 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 OR4D1Q15615 310 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 AGAP9Q5VTM2 703 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 MRNIPQ6NTE8 343 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 CILP2Q8IUL8 1156 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 SFTPA1Q8IWL2 248 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 FIBCD1Q8N539 461 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 ARRDC2Q8TBH0 407 aa9.08□□□□□ -0.96
CKAP2-201ENST00000258607 C3orf30Q96M34 536 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms