RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 SF3B4Q15427 424 aaKnown RBP eCLIP12.33□□□□□ -0.442e-7■■■■□ 25
USP30-201ENST00000257548 NBPF12Q5TAG4 269 aaPredicted RBP12.33□□□□□ -0.44
USP30-201ENST00000257548 UBE2UQ5VVX9 321 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 LCLAT1Q6UWP7 414 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 GCNT7Q6ZNI0 430 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 BTLAQ7Z6A9 289 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 ZC3HC1Q86WB0 502 aaKnown RBP12.33□□□□□ -0.44
USP30-201ENST00000257548 CEP97Q8IW35 865 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 FAR1Q8WVX9 515 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 ARNTL2Q8WYA1 636 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 TFAP2CQ92754 450 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 CCDC126Q96EE4 140 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 TSPAN17Q96FV3 270 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 TKTL2Q9H0I9 626 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 TRPV5Q9NQA5 729 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 PRMT7Q9NVM4 692 aaPredicted RBP12.33□□□□□ -0.44
USP30-201ENST00000257548 SLC30A1Q9Y6M5 507 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 LRRC14BA6NHZ5 514 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 E5RI56 91 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 PPEF2O14830 753 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 AP1G1O43747 822 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 LRIG2O94898 1065 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 ENO2P09104 434 aaPredicted RBP12.33□□□□□ -0.44
USP30-201ENST00000257548 LTA4HP09960 611 aaKnown RBP12.33□□□□□ -0.44
USP30-201ENST00000257548 LMO2P25791 158 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 INPP1P49441 399 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 TXNL4AP83876 142 aaKnown RBP12.33□□□□□ -0.44
USP30-201ENST00000257548 POU4F1Q01851 419 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 NAB1Q13506 487 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 PPP4R4Q6NUP7 873 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 DSG4Q86SJ6 1040 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 HS3ST5Q8IZT8 346 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 SGCDQ92629 289 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 TNIP3Q96KP6 325 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 SPON2Q9BUD6 331 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 ANKRD60Q9BZ19 345 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 TPK1Q9H3S4 243 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 PIN4Q9Y237 131 aaKnown RBP12.33□□□□□ -0.44
USP30-201ENST00000257548 MAGEB16A2A368 324 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 KLRG2A4D1S0 409 aaPredicted RBP12.33□□□□□ -0.44
USP30-201ENST00000257548 OR51F1A6NGY5 319 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 CLASP2O75122 1294 aaKnown RBP12.33□□□□□ -0.44
USP30-201ENST00000257548 WDR47O94967 919 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 AP2A1O95782 977 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 ARL2P36404 184 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 ARPC4P59998 168 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 ARMC4Q5T2S8 1044 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 TTC23Q5W5X9 447 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 LINC00523Q86TU6 105 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 CARM1Q86X55 608 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 EFHBQ8N7U6 833 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 SPPL2BQ8TCT7 592 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 ACDQ96AP0 544 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 ULK4Q96C45 1275 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 ACOX2Q99424 681 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 HNRNPABQ99729 332 aaKnown RBP12.33□□□□□ -0.44
USP30-201ENST00000257548 ULBP1Q9BZM6 244 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 ZFP14Q9HCL3 533 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 HOXC10Q9NYD6 342 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 ERGIC3Q9Y282 383 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 ANKRD6Q9Y2G4 727 aa12.33□□□□□ -0.44
USP30-201ENST00000257548 NFASCO94856 1347 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 TMEM221A6NGB7 291 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 HACD1B0YJ81 288 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 CYP2C8P10632 490 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 IL12AP29459 219 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 HPCAL1P37235 193 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 GSK3BP49841 420 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 PPIL2Q13356 520 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 SYPL2Q5VXT5 272 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 TWF2Q6IBS0 349 aaKnown RBP12.32□□□□□ -0.44
USP30-201ENST00000257548 BORAQ6PGQ7 559 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 CENPLQ8N0S6 344 aaPredicted RBP12.32□□□□□ -0.44
USP30-201ENST00000257548 TRPV3Q8NET8 790 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 PROX1Q92786 737 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 LTB4R2Q9NPC1 389 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 TTC24A2A3L6 582 aaPredicted RBP12.32□□□□□ -0.44
USP30-201ENST00000257548 MDM4O15151 490 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 NDUFS2O75306 463 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 INSRRP14616 1297 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 GTF2E2P29084 291 aaKnown RBP12.32□□□□□ -0.44
USP30-201ENST00000257548 SLC1A2P43004 574 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 IDH2P48735 452 aaKnown RBP12.32□□□□□ -0.44
USP30-201ENST00000257548 CCT8P50990 548 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 NIPAL4Q0D2K0 466 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 TREML2Q5T2D2 321 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 PIM3Q86V86 326 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 TBC1D21Q8IYX1 336 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 TWIST2Q8WVJ9 160 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 FUNDC2Q9BWH2 189 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 APOL5Q9BWW9 433 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 WDR12Q9GZL7 423 aaKnown RBP12.32□□□□□ -0.44
USP30-201ENST00000257548 TMEM134Q9H6X4 195 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 SP110Q9HB58 689 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 PRDM8Q9NQV8 689 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 COMMD8Q9NX08 183 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 MKS1Q9NXB0 559 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 KIAA1257Q9ULG3 409 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 GIT1Q9Y2X7 761 aa12.32□□□□□ -0.44
USP30-201ENST00000257548 FAM32AQ9Y421 112 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms