RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 IZUMO2Q6UXV1 221 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 RNF148Q8N7C7 305 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 OR4L1Q8NH43 312 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 FAM45AQ8TCE6 357 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 USP13Q92995 863 aaPredicted RBP18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 ZNF599Q96NL3 588 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 CYP2S1Q96SQ9 504 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 HERC2P3Q9BVR0 1158 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 CATSPERZQ9NTU4 200 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 SEPT3Q9UH03 358 aa18.7■□□□□ 0.58
PDLIM4-201ENST00000253754 CCDC189A1A4V9 331 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 C2orf78A6NCI8 922 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 H3BMM5 538 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 STX16-NPEPL1H3BU86 382 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 CBX4O00257 560 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 CFLARO15519 480 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 STC2O76061 302 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 ABLIM3O94929 683 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 NDST3O95803 873 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 DPP6P42658 865 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 PKNOX1P55347 436 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 ACBD5Q5T8D3 534 aaPredicted RBP18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 MRNIPQ6NTE8 343 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 GK5Q6ZS86 529 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 LMNTD2Q8IXW0 634 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 MICAL1Q8TDZ2 1067 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 RMDN1Q96DB5 314 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 ABHD8Q96I13 439 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 PSKH2Q96QS6 385 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 NPAS2Q99743 824 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 ADAMTS6Q9UKP5 1117 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 KIAA1671Q9BY89 1806 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 LRRC14BA6NHZ5 514 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 TRPC5OSA6NMA1 111 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 SUPT7LO94864 414 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 EPOP01588 193 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 ENO3P13929 434 aaPredicted RBP18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 CD1DP15813 335 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 THOP1P52888 689 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 CDH13P55290 713 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 OR4D1Q15615 310 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 LINGO4Q6UY18 593 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 PELI3Q8N2H9 469 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 MDGA1Q8NFP4 955 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 CCDC126Q96EE4 140 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 CDKN2AIPNLQ96HQ2 116 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 CDRT15Q96T59 188 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 SMPD4Q9NXE4 827 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 LRCH1Q9Y2L9 728 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 PCDHGC4Q9Y5F7 938 aa18.69■□□□□ 0.58
PDLIM4-201ENST00000253754 PPP6CO00743 305 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 KDELR3O43731 214 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 SMNDC1O75940 238 aaKnown RBP eCLIP18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 FGF18O76093 207 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 RHOCP08134 193 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 PMLP29590 882 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 CA8P35219 290 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 PPM1AP35813 382 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 CDKN1CP49918 316 aaPredicted RBP18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 ZNF140P52738 457 aaPredicted RBP18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 STC1P52823 247 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 PLD1Q13393 1074 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 TMEM240Q5SV17 173 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 ZNF678Q5SXM1 525 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 AAGABQ6PD74 315 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 DHDDSQ86SQ9 333 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 FIBCD1Q8N539 461 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 OR4K2Q8NGD2 314 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 CEP70Q8NHQ1 597 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 HMGCLL1Q8TB92 370 aa18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 MRPL17Q9NRX2 175 aaKnown RBP18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 AGO1Q9UL18 857 aaKnown RBP18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 FNDC3AQ9Y2H6 1198 aaKnown RBP18.68■□□□□ 0.58
PDLIM4-201ENST00000253754 UBA6A0AVT1 1052 aaPredicted RBP18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 TCAF2A6NFQ2 919 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 INSIG1O15503 277 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 SIX3O95343 332 aaPredicted RBP18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 PRLP01236 227 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 HDCP19113 662 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 IMPDH1P20839 514 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 CYTH1Q15438 398 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 LPCAT4Q643R3 524 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 GPR150Q8NGU9 434 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 CDK5RAP1Q96SZ6 601 aaKnown RBP18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 EML4Q9HC35 981 aaKnown RBP18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 ATP6AP2A0A1C7CYW4 349 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 UBXN8O00124 270 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 ATP6AP2O75787 350 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 ZNF37AP17032 561 aaPredicted RBP18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 ATXN3P54252 364 aaPredicted RBP18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 HTRA4P83105 476 aaPredicted RBP18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 CDC16Q13042 620 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 UNC50Q53HI1 259 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 TPGS2Q68CL5 300 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 C16orf89Q6UX73 402 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 CYHR1Q6ZMK1 362 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 GLT6D1Q7Z4J2 308 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 SLC22A9Q8IVM8 553 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 BBS5Q8N3I7 341 aa18.67■□□□□ 0.58
PDLIM4-201ENST00000253754 LPCAT1Q8NF37 534 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms