RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 CAAP1Q9H8G2 361 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 ABCC13Q9NSE7 274 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 MYRFQ9Y2G1 1151 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 SNX13Q9Y5W8 968 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 JCHAINP01591 159 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 ATF6P18850 670 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 CA8P35219 290 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 GALK1P51570 392 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 COG7P83436 770 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 SULT2A1Q06520 285 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 FASTKQ14296 549 aaKnown RBP17■□□□□ 0.31
FOXA1-201ENST00000250448 TRIM67Q6ZTA4 783 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 LPCAT2Q7L5N7 544 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 CNTN4Q8IWV2 1026 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 TMEM169Q96HH4 297 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 CXXC1Q9P0U4 656 aaPredicted RBP17■□□□□ 0.31
FOXA1-201ENST00000250448 OR12D3Q9UGF7 316 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 CNOT6Q9ULM6 557 aaKnown RBP17■□□□□ 0.31
FOXA1-201ENST00000250448 TCRBV3S1A0A5B6 114 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 H7C4K7 107 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 FBP2O00757 339 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 SLC7A1P30825 629 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 RFC2P35250 354 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 POLD2P49005 469 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 CTBP1Q13363 440 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 LINC00523Q86TU6 105 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 MIB1Q86YT6 1006 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 MYO1HQ8N1T3 1032 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 BADQ92934 168 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 DUS3LQ96G46 650 aaKnown RBP16.99■□□□□ 0.31
FOXA1-201ENST00000250448 RMND5BQ96G75 393 aaPredicted RBP16.99■□□□□ 0.31
FOXA1-201ENST00000250448 ZNF558Q96NG5 402 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 PHF12Q96QT6 1004 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 UHRF1Q96T88 793 aaPredicted RBP16.99■□□□□ 0.31
FOXA1-201ENST00000250448 SLC29A1Q99808 456 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 CLSTN3Q9BQT9 956 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 RC3H2Q9HBD1 1191 aaKnown RBP16.99■□□□□ 0.31
FOXA1-201ENST00000250448 IPO11Q9UI26 975 aaKnown RBP16.99■□□□□ 0.31
FOXA1-201ENST00000250448 PRORSD1PA6NEY8 169 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 IRAK2O43187 625 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 HMBSP08397 361 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 HNRNPLP14866 589 aaKnown RBP eCLIP16.99■□□□□ 0.31
FOXA1-201ENST00000250448 ARSAP15289 507 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 SYN1P17600 705 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 DNAJB13P59910 316 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 EFEMP1Q12805 493 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 AGKQ53H12 422 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 PKN3Q6P5Z2 889 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 SDR16C5Q8N3Y7 309 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 RIN3Q8TB24 985 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 SPPL2BQ8TCT7 592 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 PGAP3Q96FM1 320 aaPredicted RBP16.99■□□□□ 0.31
FOXA1-201ENST00000250448 MRPL57Q9BQC6 102 aaKnown RBP16.99■□□□□ 0.31
FOXA1-201ENST00000250448 SPAG4Q9NPE6 437 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 MRGBPQ9NV56 204 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 SCML2Q9UQR0 700 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 PSMD12O00232 456 aaPredicted RBP16.99■□□□□ 0.31
FOXA1-201ENST00000250448 SEC24AO95486 1093 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 HAPLN1P10915 354 aaPredicted RBP16.99■□□□□ 0.31
FOXA1-201ENST00000250448 ATP5F1P24539 256 aaPredicted RBP16.99■□□□□ 0.31
FOXA1-201ENST00000250448 YWHAQP27348 245 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 MAGEA11P43364 429 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 KPNA2P52292 529 aaKnown RBP16.99■□□□□ 0.31
FOXA1-201ENST00000250448 PCID2Q5JVF3 399 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 HMBOX1Q6NT76 420 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 OTOP3Q7RTS5 596 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.99■□□□□ 0.31
FOXA1-201ENST00000250448 GFM2Q969S9 779 aaKnown RBP16.99■□□□□ 0.31
FOXA1-201ENST00000250448 ELMO2Q96JJ3 720 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 FAR2Q96K12 515 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 OLAHQ9NV23 265 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 MTRRQ9UBK8 725 aa16.99■□□□□ 0.31
FOXA1-201ENST00000250448 LTBP2Q14767 1821 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 CEP290O15078 2479 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 PSMD3O43242 534 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 LRIG2O94898 1065 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 EFEMP2O95967 443 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 HDCP19113 662 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 ARL13BQ3SXY8 428 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 CYP2R1Q6VVX0 501 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 SLC39A11Q8N1S5 342 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 AFAP1L2Q8N4X5 818 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 GRIN3AQ8TCU5 1115 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 HEXDCQ8WVB3 486 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 PBXIP1Q96AQ6 731 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 CIB1Q99828 191 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 SLX1AQ9BQ83 275 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 MYLKQ15746 1914 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 A0A087X1B8 175 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 NEMP2A6NFY4 417 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 UBDO15205 165 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 HTRA2O43464 458 aaPredicted RBP16.98■□□□□ 0.31
FOXA1-201ENST00000250448 SRP72O76094 671 aaKnown RBP16.98■□□□□ 0.31
FOXA1-201ENST00000250448 F9P00740 461 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 IGLV3-25P01717 112 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 TAS2R39P59534 338 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 TUBA4AP68366 448 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 C6orf10Q5SRN2 563 aa16.98■□□□□ 0.31
FOXA1-201ENST00000250448 RWDD4Q6NW29 188 aaKnown RBP16.98■□□□□ 0.31
FOXA1-201ENST00000250448 MON1AQ86VX9 555 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 515 ms