RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SMIM24O75264 130 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 GJB5O95377 273 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 OGNP20774 298 aaKnown RBP19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 STX5Q13190 355 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 ADGRE1Q14246 886 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 TYSND1Q2T9J0 566 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 ICA1LQ8NDH6 482 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 C19orf60Q96EN9 201 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 PRICKLE1Q96MT3 831 aaPredicted RBP19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 SPON2Q9BUD6 331 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 MAGEH1Q9H213 219 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 PIDD1Q9HB75 910 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 DNAJC15Q9Y5T4 150 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 CDK14O94921 469 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 ALDH1A1P00352 501 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 ALDOCP09972 364 aaKnown RBP19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 SELPP16109 830 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 PSMD8P48556 350 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 ZNF140P52738 457 aaPredicted RBP19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 PFKFB4Q16877 469 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 TCTN1Q2MV58 587 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 SETMARQ53H47 684 aaPredicted RBP19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 NSUN5Q96P11 429 aaKnown RBP19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 PSKH2Q96QS6 385 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 ATOH8Q96SQ7 321 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 BCAP29Q9UHQ4 241 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 DNMT3LQ9UJW3 386 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 SARDHQ9UL12 918 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 RIMKLBQ9ULI2 386 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 MED16Q9Y2X0 877 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 PTGDR2Q9Y5Y4 395 aa19.51■□□□□ 0.71
CDC42EP1-201ENST00000249014 PRSS51A0A1B0GVH4 220 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 GALTP07902 379 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 PMLP29590 882 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 ATP5C1P36542 298 aaKnown RBP19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 SCNN1BP51168 640 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 SGSHP51688 502 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 FOXA1P55317 472 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 FOLH1Q04609 750 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 MAPRE2Q15555 327 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 DLG3Q92796 817 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 ASB9Q96DX5 294 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 LRGUKQ96M69 825 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 BTBD9Q96Q07 612 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 TTLL2Q9BWV7 592 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 PCDHAC1Q9H158 963 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 UNC93B1Q9H1C4 597 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 POPDC3Q9HBV1 291 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 MRGBPQ9NV56 204 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 NLE1Q9NVX2 485 aaPredicted RBP19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 SEPT3Q9UH03 358 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 SRRDQ9UH36 339 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 SNRPB2P08579 225 aaKnown RBP19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 HOXB8P17481 243 aaPredicted RBP19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 SMARCB1Q12824 385 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 LHX8Q68G74 356 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 DENND1CQ8IV53 801 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 CLYBLQ8N0X4 340 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 MDGA1Q8NFP4 955 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 OR4K2Q8NGD2 314 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 PKP2Q99959 881 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 ZBED2Q9BTP6 218 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 CINPQ9BW66 212 aaPredicted RBP19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 UBA2Q9UBT2 640 aaPredicted RBP19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 IKZF3Q9UKT9 509 aa19.5■□□□□ 0.71
CDC42EP1-201ENST00000249014 UBA6A0AVT1 1052 aaPredicted RBP19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 TXNDC9O14530 226 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 TRIM24O15164 1050 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 PRLP01236 227 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 PIM1P11309 404 aaPredicted RBP19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 CDH4P55283 916 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 PAQR3Q6TCH7 311 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 ANKS3Q6ZW76 656 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 SPATA24Q86W54 205 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 TICAM1Q8IUC6 712 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 FUNDC1Q8IVP5 155 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 RHEBL1Q8TAI7 183 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 RMDN1Q96DB5 314 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 TSEN34Q9BSV6 310 aaKnown RBP19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 TTPALQ9BTX7 342 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 AKTIPQ9H8T0 292 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 MID1IP1Q9NPA3 183 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 GIMAP2Q9UG22 337 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 FAM50BQ9Y247 325 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 PRORSD1PA6NEY8 169 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 H7C4K7 107 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 KDELR3O43731 214 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 KLKB1P03952 638 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 RPL17P18621 184 aaKnown RBP19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 CR2P20023 1033 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 FMO4P31512 558 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 CDKN1CP49918 316 aaPredicted RBP19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 RALGDSQ12967 914 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 MTA1Q13330 715 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 TRIM25Q14258 630 aaKnown RBP19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 PDK3Q15120 406 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 TLR1Q15399 786 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 RARS2Q5T160 578 aaKnown RBP19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 TMEM126BQ8IUX1 230 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 BBS5Q8N3I7 341 aa19.49■□□□□ 0.71
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