RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 FAM71AQ8IYT1 594 aa7.52□□□□□ -1.2
RIF1-201ENST00000243326 SETD9Q8NE22 299 aa7.52□□□□□ -1.2
RIF1-201ENST00000243326 NELL1Q92832 810 aa7.52□□□□□ -1.2
RIF1-201ENST00000243326 P2RY11Q96G91 374 aa7.52□□□□□ -1.2
RIF1-201ENST00000243326 CPXM1Q96SM3 734 aa7.52□□□□□ -1.2
RIF1-201ENST00000243326 ZSCAN5BA6NJL1 495 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 SAP18O00422 153 aaKnown RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 CASKO14936 926 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 FARP2O94887 1054 aaPredicted RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 ITGAVP06756 1048 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 MAPTP10636 758 aaKnown RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 WDR4P57081 412 aaKnown RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 RAB10P61026 200 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 ZDHHC24Q6UX98 284 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 RNASE11Q8TAA1 199 aaKnown RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 TLCD1Q96CP7 247 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 BARD1Q99728 777 aaKnown RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 NAV3Q8IVL0 2385 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 NARSO43776 548 aaKnown RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 RECQL4O94761 1208 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 DCP1BQ8IZD4 617 aaKnown RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 GLIS1Q8NBF1 620 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 OR52B2Q96RD2 323 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 SEPT4O43236 478 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 CCNDBP1O95273 360 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 BHLHB9Q6PI77 547 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 CHST15Q7LFX5 561 aaPredicted RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 PHTF2Q8N3S3 785 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 OR52E6Q96RD3 313 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 TLR8Q9NR97 1041 aaKnown RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 ZNF490Q9ULM2 529 aaPredicted RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 TRBV23OR9-2A0A075B6M9 112 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 C17orf102A2RUQ5 167 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 SLC28A2O43868 658 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 ZNF268Q14587 947 aaPredicted RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 ATP13A5Q4VNC0 1218 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 ARL13AQ5H913 290 aaPredicted RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 RHBDF2Q6PJF5 856 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 ADGRE1Q14246 886 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 FAM20CQ8IXL6 584 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 POMGNT2Q8NAT1 580 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 RAD51AP1Q96B01 352 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 ZNF518BQ9C0D4 1074 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 MAGEE1Q9HCI5 957 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 TBC1D13Q9NVG8 400 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 TUBGCP4Q9UGJ1 667 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 CD84Q9UIB8 345 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 UBQLN1Q9UMX0 589 aaKnown RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 PPP2R3BQ9Y5P8 575 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 RIC1Q4ADV7 1423 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 LRIG2O94898 1065 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 IGFBP5P24593 272 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 MAPK1P28482 360 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 TAF1CQ15572 869 aaPredicted RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 CHADLQ6NUI6 762 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 SYNPOQ8N3V7 929 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 OR10H3O60404 316 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 CSN2P05814 226 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 OR4Q2P0C623 313 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 ACVR2BQ13705 512 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 TLR1Q15399 786 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 ASB18Q6ZVZ8 466 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 ADHFE1Q8IWW8 467 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 BHLHE41Q9C0J9 482 aaPredicted RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 THRBP10828 461 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 PTGS2P35354 604 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 TTLL9Q3SXZ7 439 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 TIGD7Q6NT04 549 aaPredicted RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 GALNTL5Q7Z4T8 443 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 R3HCC1LQ7Z5L2 792 aaKnown RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 SLC44A1Q8WWI5 657 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 ADGRE3Q9BY15 652 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 MYOM1P52179 1685 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 DLC1Q96QB1 1528 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 HDCP19113 662 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 GPRIN3Q6ZVF9 776 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 SLC22A16Q86VW1 577 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 SFRP1Q8N474 314 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 CDK15Q96Q40 435 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 OSBPL11Q9BXB4 747 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 SVILO95425 2214 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 KLRG2A4D1S0 409 aaPredicted RBP7.52□□□□□ -1.21
RIF1-201ENST00000243326 STXBP5Q5T5C0 1151 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 DENND1CQ8IV53 801 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 TBC1D19Q8N5T2 526 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 LINGO3P0C6S8 592 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 MC1RQ01726 317 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 CREB5Q02930 508 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 GRIK4Q16099 956 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 FAM171A1Q5VUB5 890 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 FAM110BQ8TC76 370 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 DIRAS2Q96HU8 199 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 PLLPQ9Y342 182 aa7.52□□□□□ -1.21
RIF1-201ENST00000243326 TBKBP1A7MCY6 615 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 RGL2O15211 777 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 NR4A2P43354 598 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 MAPKAPK3Q16644 382 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 SPRED3Q2MJR0 410 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 TMEM203Q969S6 136 aa7.51□□□□□ -1.21
RIF1-201ENST00000243326 IRF2BPLQ9H1B7 796 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms