RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 MYCLP1P12525 358 aaPredicted RBP12.75□□□□□ -0.37
PDZD11-201ENST00000239666 GLB1P16278 677 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 CR2P20023 1033 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 IL1R2P27930 398 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 EPHB1P54762 984 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 SLC25A11Q02978 314 aaKnown RBP12.75□□□□□ -0.37
PDZD11-201ENST00000239666 DPTQ07507 201 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 COL28A1Q2UY09 1125 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 OXLD1Q5BKU9 147 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 RD3Q7Z3Z2 195 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 CNGA4Q8IV77 575 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 WDR36Q8NI36 951 aaKnown RBP12.75□□□□□ -0.37
PDZD11-201ENST00000239666 NUS1Q96E22 293 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 TMEM74Q96NL1 305 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 SRPK1Q96SB4 655 aaKnown RBP12.75□□□□□ -0.37
PDZD11-201ENST00000239666 GSDMCQ9BYG8 508 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 TRIM7Q9C029 511 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 BRD8Q9H0E9 1235 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 LUC7LQ9NQ29 371 aaKnown RBP12.75□□□□□ -0.37
PDZD11-201ENST00000239666 TRNAU1APQ9NX07 287 aaKnown RBP12.75□□□□□ -0.37
PDZD11-201ENST00000239666 AKAP7Q9P0M2 348 aaPredicted RBP12.75□□□□□ -0.37
PDZD11-201ENST00000239666 GULP1Q9UBP9 304 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 GPR34Q9UPC5 381 aa12.75□□□□□ -0.37
PDZD11-201ENST00000239666 ZZEF1O43149 2961 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 MUSKO15146 869 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 BRINP1O60477 761 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 PGLSO95336 258 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 GARSP41250 739 aaKnown RBP12.74□□□□□ -0.37
PDZD11-201ENST00000239666 SLC1A1P43005 524 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 RGRP47804 291 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 GABREP78334 506 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 GALNT2Q10471 571 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 ILF3Q12906 894 aaKnown RBP eCLIP12.74□□□□□ -0.37
PDZD11-201ENST00000239666 BIRC2Q13490 618 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 C1orf61Q13536 156 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 ALG11Q2TAA5 492 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 ANKRD20A8PQ5CZ79 823 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 TAF8Q7Z7C8 310 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 NRSN1Q8IZ57 195 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 RBFAQ8N0V3 343 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.74□□□□□ -0.37
PDZD11-201ENST00000239666 TSACCQ96A04 125 aaPredicted RBP12.74□□□□□ -0.37
PDZD11-201ENST00000239666 ITPKCQ96DU7 683 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 GFM1Q96RP9 751 aaKnown RBP12.74□□□□□ -0.37
PDZD11-201ENST00000239666 UBL7Q96S82 380 aaPredicted RBP12.74□□□□□ -0.37
PDZD11-201ENST00000239666 LGMNQ99538 433 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 DNAJC7Q99615 494 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 CCDC3Q9BQI4 270 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 ADGRE3Q9BY15 652 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 XPO4Q9C0E2 1151 aaKnown RBP12.74□□□□□ -0.37
PDZD11-201ENST00000239666 CDH19Q9H159 772 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 NOD2Q9HC29 1040 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 B4GALT6Q9UBX8 382 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 APPL1Q9UKG1 709 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 INTUQ9ULD6 942 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 COQ6Q9Y2Z9 468 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 OR1A2Q9Y585 309 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 PCDHGC4Q9Y5F7 938 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 LRRK1Q38SD2 2015 aa12.74□□□□□ -0.37
PDZD11-201ENST00000239666 CCDC187A0A096LP49 1063 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 LY6G6EA0A0G2JKS1 128 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 TEX51A0A1B0GUA7 166 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 RGSL1A5PLK6 1076 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 NUDT21O43809 227 aaKnown RBP12.73□□□□□ -0.37
PDZD11-201ENST00000239666 HEXIM1O94992 359 aaKnown RBP12.73□□□□□ -0.37
PDZD11-201ENST00000239666 PEX11BO96011 259 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 CCNB1P14635 433 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 ITIH2P19823 946 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 RALGDSQ12967 914 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 LRRC38Q5VT99 294 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 ALG1LQ6GMV1 187 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 GUSBP11Q6P575 273 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 OGFOD3Q6PK18 319 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 C19orf48Q6RUI8 117 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 ARHGAP36Q6ZRI8 547 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 ZNF765Q7L2R6 523 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 SLC35F3Q8IY50 421 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 NETO2Q8NC67 525 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 FAM46DQ8NEK8 389 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 CCHCR1Q8TD31 782 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 MAML1Q92585 1016 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 FUBP1Q96AE4 644 aaKnown RBP12.73□□□□□ -0.37
PDZD11-201ENST00000239666 COQ10AQ96MF6 247 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 MCCC1Q96RQ3 725 aaPredicted RBP12.73□□□□□ -0.37
PDZD11-201ENST00000239666 DPYSL5Q9BPU6 564 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 TEX101Q9BY14 249 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 CLPBQ9H078 707 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 RAD18Q9NS91 495 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 DDX56Q9NY93 547 aaKnown RBP12.73□□□□□ -0.37
PDZD11-201ENST00000239666 RAI2Q9Y5P3 530 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 U3KQA8 63 aa12.73□□□□□ -0.37
PDZD11-201ENST00000239666 DSPP15924 2871 aaKnown RBP12.73□□□□□ -0.37
PDZD11-201ENST00000239666 SHROOM3Q8TF72 1996 aa12.72□□□□□ -0.37
PDZD11-201ENST00000239666 TGM2P21980 687 aa12.72□□□□□ -0.37
PDZD11-201ENST00000239666 IL4RP24394 825 aa12.72□□□□□ -0.37
PDZD11-201ENST00000239666 TNNT3P45378 269 aaPredicted RBP12.72□□□□□ -0.37
PDZD11-201ENST00000239666 DPYSL3Q14195 570 aa12.72□□□□□ -0.37
PDZD11-201ENST00000239666 TPRG1LQ5T0D9 272 aa12.72□□□□□ -0.37
PDZD11-201ENST00000239666 CCDC70Q6NSX1 233 aa12.72□□□□□ -0.37
PDZD11-201ENST00000239666 ZSWIM9Q86XI8 627 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms