RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 EEPD1Q7L9B9 569 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 MAGEB10Q96LZ2 347 aaPredicted RBP12.87□□□□□ -0.35
VAMP4-201ENST00000236192 FAM49AQ9H0Q0 323 aaPredicted RBP12.87□□□□□ -0.35
VAMP4-201ENST00000236192 ZBTB26Q9HCK0 441 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 SORBS2O94875 1100 aaKnown RBP12.87□□□□□ -0.35
VAMP4-201ENST00000236192 NDUFB10O96000 172 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 PTPN9P43378 593 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 PIK3CGP48736 1102 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 NR2C2P49116 596 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 PLA2G16P53816 162 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 POU4F1Q01851 419 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 FAPQ12884 760 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 SYVN1Q86TM6 617 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 TRIM48Q8IWZ4 208 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 C8orf37Q96NL8 207 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 MUS81Q96NY9 551 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 MRPL57Q9BQC6 102 aaKnown RBP12.87□□□□□ -0.35
VAMP4-201ENST00000236192 CASS4Q9NQ75 786 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 SLC9A8Q9Y2E8 581 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 CYP3A7-CYP3A51PA0A087WV96 503 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 RIMBP2O15034 1052 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 MSH4O15457 936 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 KCNA5P22460 613 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 CYP3A7P24462 503 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 MYL6P60660 151 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 CYP24A1Q07973 514 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 CEACAM7Q14002 265 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 HIST2H2ACQ16777 129 aaPredicted RBP12.87□□□□□ -0.35
VAMP4-201ENST00000236192 DDI2Q5TDH0 399 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 PIWIL3Q7Z3Z3 882 aaKnown RBP12.87□□□□□ -0.35
VAMP4-201ENST00000236192 GALNT5Q7Z7M9 940 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 NAT8LQ8N9F0 302 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 POF1BQ8WVV4 589 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 TFAP2CQ92754 450 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 CRISPLD1Q9H336 500 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 CD274Q9NZQ7 290 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 NEO1Q92859 1461 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 GRAP2O75791 330 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 ITGB3P05106 788 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 RAP2AP10114 183 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 CYP2C8P10632 490 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 PTPN1P18031 435 aaKnown RBP12.87□□□□□ -0.35
VAMP4-201ENST00000236192 CLCQ05315 142 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 GNA13Q14344 377 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 STILQ15468 1287 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 MEP1AQ16819 746 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 FNDC5Q8NAU1 212 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 REXO5Q96IC2 774 aaKnown RBP12.87□□□□□ -0.35
VAMP4-201ENST00000236192 MNTQ99583 582 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 RASSF1Q9NS23 344 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 TMEM216Q9P0N5 145 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 ERVV-1B6SEH8 477 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 GMDSO60547 372 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 XYLBO75191 536 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 SNAPC5O75971 98 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 CYP11A1P05108 521 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 BMP2P12643 396 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 MYL12AP19105 171 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 FMO3P31513 532 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 GMFBP60983 142 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 TCEAL1Q15170 157 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 CMC1Q7Z7K0 106 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 HTR3CQ8WXA8 447 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 VAT1Q99536 393 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 ZC3H12CQ9C0D7 883 aaKnown RBP12.86□□□□□ -0.35
VAMP4-201ENST00000236192 ATP13A3Q9H7F0 1226 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 TOPORSQ9NS56 1045 aaPredicted RBP12.86□□□□□ -0.35
VAMP4-201ENST00000236192 MAU2Q9Y6X3 613 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 PRSS44E7EML9 344 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 PSMA1P25786 263 aaKnown RBP12.86□□□□□ -0.35
VAMP4-201ENST00000236192 SFNP31947 248 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 SNAPC1Q16533 368 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 SLX4IPQ5VYV7 408 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 IL31Q6EBC2 164 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 PYHIN1Q6K0P9 492 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 NPNTQ6UXI9 565 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 SYNE4Q8N205 404 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 OR6Q1Q8NGQ2 317 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 NPLOC4Q8TAT6 608 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 ZNF606Q8WXB4 792 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 LGALS12Q96DT0 336 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 SLC45A3Q96JT2 553 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 SEZ6LQ9BYH1 1024 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 FGFBP2Q9BYJ0 223 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 ABCB9Q9NP78 766 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 BRD7Q9NPI1 651 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 STARD7Q9NQZ5 370 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 DNAJB9Q9UBS3 223 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 SLC13A4Q9UKG4 626 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 NCKAP1Q9Y2A7 1128 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 HCN4Q9Y3Q4 1203 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 KAT6BQ8WYB5 2073 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 ATRNO75882 1429 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 EEF2KO00418 725 aaKnown RBP12.86□□□□□ -0.35
VAMP4-201ENST00000236192 CYP2F1P24903 491 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 TCP10Q12799 353 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 ACOX1Q15067 660 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 ITSN1Q15811 1721 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 FBXO43Q4G163 708 aa12.86□□□□□ -0.35
VAMP4-201ENST00000236192 AKIRIN2Q53H80 203 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms