RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CCDC110Q8TBZ0 833 aa13.72□□□□□ -0.21
VEGFA-201ENST00000230480 OR1E3Q8WZA6 343 aa13.72□□□□□ -0.21
VEGFA-201ENST00000230480 TEX101Q9BY14 249 aa13.72□□□□□ -0.21
VEGFA-201ENST00000230480 FGF22Q9HCT0 170 aa13.72□□□□□ -0.21
VEGFA-201ENST00000230480 TMPRSS11EQ9UL52 423 aa13.72□□□□□ -0.21
VEGFA-201ENST00000230480 DNPEPQ9ULA0 475 aa13.72□□□□□ -0.21
VEGFA-201ENST00000230480 PYCARDQ9ULZ3 195 aa13.72□□□□□ -0.21
VEGFA-201ENST00000230480 RPL26L1Q9UNX3 145 aaKnown RBP13.72□□□□□ -0.21
VEGFA-201ENST00000230480 FRYQ5TBA9 3013 aa13.72□□□□□ -0.21
VEGFA-201ENST00000230480 H7C0C1 242 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 CASC3O15234 703 aaKnown RBP13.71□□□□□ -0.21
VEGFA-201ENST00000230480 FLRT2O43155 660 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 NEBLO76041 1014 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 TJP3O95049 919 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 PCCBP05166 539 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 HOXC4P09017 264 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-201ENST00000230480 ATP5OP48047 213 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 DPTQ07507 201 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 MTM1Q13496 603 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 ACOX1Q15067 660 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 TRIP6Q15654 476 aaKnown RBP13.71□□□□□ -0.21
VEGFA-201ENST00000230480 PROX2Q3B8N5 592 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 CFAP58Q5T655 872 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 KCTD11Q693B1 232 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 RANBP10Q6VN20 620 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 MACC1Q6ZN28 852 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 LYSMD3Q7Z3D4 306 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 NLRP8Q86W28 1048 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 TTC30BQ8N4P2 665 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 EID2Q8N6I1 236 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 UBL4BQ8N7F7 174 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 RHBDD1Q8TEB9 315 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 TSACCQ96A04 125 aaPredicted RBP13.71□□□□□ -0.21
VEGFA-201ENST00000230480 VAT1Q99536 393 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 CD84Q9UIB8 345 aa13.71□□□□□ -0.21
VEGFA-201ENST00000230480 C5orf60A6NFR6 353 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 FADS2P1A8MWK0 482 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 SCAMP1O15126 338 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 SIGLEC6O43699 453 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 MAGEC1O60732 1142 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 NDST3O95803 873 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 AGTP01019 485 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 EPOP01588 193 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 CEACAM5P06731 702 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 CYP2A6P11509 494 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-201ENST00000230480 PSMB4P28070 264 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 KIAA1024LP59773 190 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 SIM1P81133 766 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-201ENST00000230480 DNAJC3Q13217 504 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 C1orf61Q13536 156 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 NFATC4Q14934 902 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 PCSK7Q16549 785 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 ODF2Q5BJF6 829 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 SIRPB2Q5JXA9 342 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 DENND2CQ68D51 928 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 PARGQ86W56 976 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 TXLNBQ8N3L3 684 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 PNPLA1Q8N8W4 532 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 GPR26Q8NDV2 337 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 ZNF548Q8NEK5 533 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-201ENST00000230480 SETD7Q8WTS6 366 aaKnown RBP13.7□□□□□ -0.22
VEGFA-201ENST00000230480 SKA1Q96BD8 255 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 RTP4Q96DX8 246 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 NUS1Q96E22 293 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 PDXPQ96GD0 296 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 SPATA13Q96N96 652 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 LRRC61Q9BV99 259 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 TMEM121BQ9BXQ6 578 aaPredicted RBP13.7□□□□□ -0.22
VEGFA-201ENST00000230480 GBA3Q9H227 469 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 CARD9Q9H257 536 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 MRPL40Q9NQ50 206 aaKnown RBP13.7□□□□□ -0.22
VEGFA-201ENST00000230480 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.7□□□□□ -0.22
VEGFA-201ENST00000230480 FAM153AQ9UHL3 310 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 TRHDEQ9UKU6 1024 aa13.7□□□□□ -0.22
VEGFA-201ENST00000230480 ZNF106Q9H2Y7 1883 aaKnown RBP13.7□□□□□ -0.22
VEGFA-201ENST00000230480 KIF26BQ2KJY2 2108 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 GAPDHSO14556 408 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-201ENST00000230480 TOR1BO14657 336 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 KCNN4O15554 427 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 MTSS1O43312 755 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 LIASO43766 372 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 SPINK2P20155 84 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 TEAD1P28347 426 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 GRK6P43250 576 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 POLD2P49005 469 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 SPINT3P49223 89 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 ARRB1P49407 418 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-201ENST00000230480 PTPRCAPQ14761 206 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 RPS6KA1Q15418 735 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 HENMT1Q5T8I9 393 aaKnown RBP13.69□□□□□ -0.22
VEGFA-201ENST00000230480 DARS2Q6PI48 645 aaKnown RBP13.69□□□□□ -0.22
VEGFA-201ENST00000230480 USP45Q70EL2 814 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 NRROSQ86YC3 692 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 PHACTR4Q8IZ21 702 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 OXR1Q8N573 874 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 FAM71DQ8N9W8 422 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 CCL4L1Q8NHW4 92 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 C1orf54Q8WWF1 131 aa13.69□□□□□ -0.22
VEGFA-201ENST00000230480 SCARF2Q96GP6 870 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-201ENST00000230480 COX14Q96I36 57 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms