RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Aldh1a7O35945 501 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 PargO88622 969 aaKnown RBP23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Aldh1a1P24549 501 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 LynP25911 512 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Lypla1P97823 230 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Gpat3Q8C0N2 438 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 LnpepQ8C129 1025 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Olfr30Q8VGD8 315 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Rbm47Q91WT8 590 aaKnown RBP23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Sars2Q9JJL8 518 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 CkmP07310 381 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Mxd1P50538 227 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Gpsm3Q3U1Z5 159 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Ccdc177Q3UHB8 706 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Lrrc14bQ3UJB3 510 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 AY358078Q6UY53 465 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Coq9Q8K1Z0 313 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Gpc6Q9R087 555 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Vbp1P61759 196 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hyal5Q812F3 526 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Vps26bQ8C0E2 336 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Rcor1Q8CFE3 480 aa23.15■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Olfr1200A2ATJ4 336 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hist1h2abC0HKE1 130 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hist1h2acC0HKE2 130 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hist1h2adC0HKE3 130 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hist1h2aeC0HKE4 130 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hist1h2agC0HKE5 130 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hist1h2aiC0HKE6 130 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hist1h2anC0HKE7 130 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hist1h2aoC0HKE8 130 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hist1h2apC0HKE9 130 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Msx2Q03358 267 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Zfp953Q3UPV7 304 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Gm11437Q5QR91 290 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Cd34Q64314 382 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Olfr867Q7TRF3 331 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Trim69Q80X56 500 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hist3h2aQ8BFU2 130 aaKnown RBP23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hist1h2afQ8CGP5 130 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hist1h2ahQ8CGP6 128 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Hist1h2akQ8CGP7 130 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 H2afjQ8R1M2 129 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Mov10l1Q99MV5 1187 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Krt88Q9CPR6 171 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 GmfbQ9CQI3 142 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Med11Q9D8C6 117 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Cntnap5cQ0V8T7 1305 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Lilrb3P97484 841 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Entpd7Q3TCT4 606 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Nr2f1Q60632 422 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Stmnd1Q6P3A1 279 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Trpm4Q7TN37 1213 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Ap3s2Q8BSZ2 193 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Serpina11Q8CIE0 424 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Msh4Q99MT2 958 aa23.14■■□□□ 1.3
Sh3rf1-201ENSMUST00000034060 Gm13040A2A8C4 496 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Klhl3E0CZ16 587 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Hs3st1O35310 311 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Kpna3O35344 521 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Rab2aP53994 212 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Ctps2P70303 586 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Tapt1Q4VBD2 564 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Serpina3aQ6P4P1 422 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 GnasQ6R0H7 1133 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Trmt13Q8BYH3 481 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Parp12Q8BZ20 711 aaKnown RBP23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Mrgpra2Q91WW4 305 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Pcdhga9Q91XX9 932 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Atoh1P48985 351 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Smim24Q0VG18 120 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Zbtb2Q3V3W4 514 aaKnown RBP23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Wscd1Q80XH4 572 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Sec16bQ91XT4 1051 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Pcdhb19Q91Y01 801 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 PacrglQ9D3X5 248 aa23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Znf207Q9JMD0 495 aaKnown RBP23.14■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Akirin2B1AXD8 201 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Sod3O09164 251 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 PdgfrbP05622 1098 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 HmgcrQ01237 887 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Xkr9Q5GH62 373 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Neto2Q8BNJ6 525 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Sh3d19Q91X43 789 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Kat8Q9D1P2 458 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 CremP27699 357 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Ptpn1P35821 432 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Nup62Q63850 526 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Slc39a4Q78IQ7 660 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Dus1lQ8C2P3 475 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 RfkQ8CFV9 155 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 St7lQ8K4P7 559 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 P2yr13Q9D8I2 337 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Prg3Q9JL95 222 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 FshrP35378 692 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Prickle1Q3U5C7 832 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Pcdh19Q80TF3 1145 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 ScaiQ8C8N2 606 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Sumf1Q8R0F3 372 aa23.13■■□□□ 1.29
Sh3rf1-201ENSMUST00000034060 Zfp969A2ART2 485 aa23.13■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms