RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Zfp280bQ505F4 534 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Cnpy4Q8BQ47 245 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Mtfr1Q99MB2 328 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Pdha2P35487 391 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Tmem173Q3TBT3 378 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Fam129aQ3UW53 926 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Atg16l2Q6KAU8 623 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Ccdc117Q6PB51 277 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Mon1aQ6PDG8 556 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Olfr533Q7TRT7 320 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Zdhhc15Q8BGJ0 337 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Pnpla8Q8K1N1 776 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Wnt9aQ8R5M2 365 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 HpgdQ8VCC1 269 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Akr1e2Q9DCT1 301 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 TazI7HJS2 263 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Polr2jO08740 117 aaKnown RBP18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Hpcal1P62748 193 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Gba2Q69ZF3 918 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Heg1E9Q7X6 1337 aa18.48■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Tbkbp1A2A9T0 611 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 PpigA2AR02 752 aaKnown RBP18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Vmn2r57L7N269 863 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 HunkO88866 714 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 GhrP16882 650 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Nek10Q3UGM2 1111 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Itm2aQ61500 263 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Tlr12Q6QNU9 906 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Parp12Q8BZ20 711 aaKnown RBP18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Mkl1Q8K4J6 964 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Ints11Q9CWS4 600 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Tbc1d15Q9CXF4 671 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Ppil2Q9D787 521 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Dhx34Q9DBV3 1145 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Hmgn3Q9DCB1 99 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Gm6509A0A0J9YUV1 481 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Kcnt2D3Z649 1135 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 F6Y6L6 278 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Gm6351K9J7D1 481 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Rhbdf1Q6PIX5 856 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Ints7Q7TQK1 966 aaKnown RBP18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Q8CCC3 530 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Ttc23Q8CHY7 488 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Mcoln3Q8R4F0 553 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Eif3mQ99JX4 374 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Snx7Q9CY18 387 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Ddx60E9PZQ1 1711 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Grpel2O88396 224 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Il3P01586 166 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Tgfb2P27090 414 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Ipcef1Q5DU31 406 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Rad54bQ6PFE3 886 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Slc15a5Q8CBB2 566 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 DeraQ91YP3 318 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Ecrg4Q99LS0 148 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Tmem80Q9D3H0 123 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Snx29Q9D3S3 818 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Aldoart1A6ZI46 419 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Stat5aP42230 793 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Flt3Q00342 1000 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Aarsd1Q3THG9 412 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Med22Q62276 200 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Olfr293Q7TS10 336 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Olfr213Q7TS32 327 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Exd1Q8CDF7 570 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Gemin2Q9CQQ4 269 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Fam212aQ9CX62 282 aa18.47■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Tm4sf1Q64302 202 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 PpidQ9CR16 370 aaKnown RBP18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Agpat3Q9D517 376 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Tex44Q9DA60 530 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Nt5cQ9JM14 200 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Znf354bQ9QXT9 601 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Jag1Q9QXX0 1218 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 GabreA2AMW3 916 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 PiggD3Z3Y1 983 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 NapsaO09043 419 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 PrkacbP68181 351 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Zfp868Q3UTQ6 422 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Lrrc8bQ5DU41 803 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Pqbp1Q91VJ5 263 aaKnown RBP18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Asb6Q91ZU1 418 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 March2Q99M02 246 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 NwcQ9CQI4 244 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Khdc3Q9CWU5 440 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Anks3Q9CZK6 655 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Spesp1Q9D5A0 399 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Anxa3O35639 323 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Lire1P11260 357 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Shmt1P50431 478 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 CtskP55097 329 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Btg1-ps1Q3V0S2 161 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Btg1-ps2Q3V0X0 161 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Capn3Q64691 821 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Cyp2c54Q6XVG2 490 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Tnfaip8l1Q8K288 186 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Pth2rQ91V95 546 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Cldn22Q9D7U6 220 aa18.46■□□□□ 0.55
Ebf3-201ENSMUST00000033378 Olfr1145A2AVC7 325 aa18.46■□□□□ 0.54
Ebf3-201ENSMUST00000033378 Hsd17b14E9Q3D4 273 aa18.46■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms