RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 MipepA6H611 711 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Fam181aJ3QNB7 292 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 ShdO88834 343 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Rb1P13405 921 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Ythdf1P59326 559 aaKnown RBP16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 VegfaQ00731 214 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Aldh16a1Q571I9 802 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Six2Q62232 296 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Arhgef33Q8BW86 850 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Tpgs1Q99MS8 303 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Tmed11Q9D2R4 215 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Efhc1Q9D9T8 648 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Kcnq4Q9JK97 696 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Khdrbs3Q9R226 346 aaKnown RBP16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Has3O08650 554 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Klrk1O54709 232 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Cd40lgP27548 260 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Gm4951Q3UED7 406 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 CltbQ6IRU5 229 aaKnown RBP16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Pex26Q8BGI5 305 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Tyw1Q8BJM7 721 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Cgrrf1Q8BMJ7 332 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Rbms3Q8BWL5 431 aaKnown RBP16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 BroxQ8K2Q7 411 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 B4galt4Q9JJ04 344 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Epm2aQ9WUA5 330 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Gm5478D3Z6R0 159 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Prdm15E9Q8T2 1174 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Herc6F2Z461 1003 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Gm29609Q3UU56 907 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 AcdQ5EE38 416 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Clhc1Q5M6W3 596 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 XiapQ60989 496 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Gtf3c2Q8BL74 907 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 LipmQ8K2A6 422 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 GldcQ91W43 1025 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Ribc2Q9D4Q1 309 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Ulk2Q9QY01 1037 aa16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Kif20bQ80WE4 1774 aaKnown RBP16.6■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Zfp612A0A1D5RMC2 672 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 TazI7HJS2 263 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Mybpc3O70468 1270 aaKnown RBP16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Olfm1O88998 485 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Idh2P54071 452 aaKnown RBP16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Ankrd27Q3UMR0 1048 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Dnajc11Q5U458 559 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Sp140Q6NSQ5 534 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Olfr293Q7TS10 336 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Snx32Q80ZJ7 404 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Efr3aQ8BG67 819 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Creb3l2Q8BH52 521 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Samd7Q8C8Y5 445 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 SynpoQ8CC35 929 aaKnown RBP16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Epb41l1Q9Z2H5 879 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Myom1Q62234 1667 aaKnown RBP16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Ildr2B5TVM2 661 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Sgo2bJ3QMK1 1167 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Tpst2O88856 376 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Ptchd3Q0EEE2 906 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Znf513Q6PD29 541 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Olfr798Q7TRH8 311 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Vgll2Q8BGW8 322 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Pcdha6Q91Y14 946 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Ssu72Q9CY97 194 aaKnown RBP16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Gpihbp1Q9D1N2 228 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Pop5Q9DB28 169 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Sars2Q9JJL8 518 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 AuhQ9JLZ3 314 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Slc25a14Q9Z2B2 325 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Mup18A2BIM8 181 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Vmn1r39G3UWE6 305 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Top6blJ3QMY9 579 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Mup11P04938 181 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Gm21320Q4FZE8 181 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Olfr1152Q7TR34 310 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Pabpc5Q8C7D3 381 aaKnown RBP16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 B3galt6Q91Z92 325 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Gm28363A0A087WQW2 129 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Rnf169E9Q7F2 694 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Dhx15O35286 795 aaKnown RBP16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 PenkP22005 268 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Gabrr2P56476 465 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Copz1P61924 177 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Mfsd3Q5U419 412 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Zfyve1Q810J8 777 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 R3hcc1lQ8BJM3 775 aaKnown RBP16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Pex5lQ8C437 567 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Lrrc42Q8R2U7 421 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Dlg2Q91XM9 852 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Armc8Q9DBR3 673 aa16.59■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Rhox13F6YCR7 232 aa16.58■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 KlO35082 1014 aa16.58■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Hk1P17710 974 aa16.58■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 2900092C05RikQ5I0V9 184 aa16.58■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Fam20cQ5MJS3 579 aa16.58■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Nr2f1Q60632 422 aa16.58■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Ifi47Q61635 420 aa16.58■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Scaf4Q6PFF0 1209 aaKnown RBP16.58■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 Cyp2r1Q6VVW9 501 aa16.58■□□□□ 0.25
Ubfd1-201ENSMUST00000033158 PolnQ7TQ07 864 aa16.58■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms