RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Sirpb1aA0A0A6YYP6 397 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Pgbd1E9Q492 415 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Slc27a6E9Q9W4 619 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Fpr-rs3O88537 343 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Rrm2P11157 390 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Cd3gP11942 182 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 GhrP16882 650 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Plk2P53351 682 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Trpv5P69744 723 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Ldb1P70662 411 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Mc1rQ01727 315 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Slc22a23Q3UHH2 689 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Olfr325Q5NCD2 326 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Slc5a10Q5SWY8 596 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Slc6a3Q61327 619 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Prpf38bQ80SY5 542 aaKnown RBP12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Ptk7Q8BKG3 1062 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Slco1a5Q91YY5 670 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Chaf1bQ9D0N7 572 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Hmg20aQ9DC33 346 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Stau1Q9Z108 487 aaKnown RBP12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Ighv11-2A0A075B5R8 117 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Pdzd7E9Q9W7 1021 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 NmbrO54799 390 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 EgfP01132 1217 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Timm13P62075 95 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Rabl6Q5U3K5 725 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Bcap31Q61335 245 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Vsx2Q61412 361 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Dlx3Q64205 287 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Ca4Q64444 305 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Dsg1bQ7TSF1 1060 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Hspa12bQ9CZJ2 685 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Tex22Q9D9U4 189 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Capn10Q9ESK3 666 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Oxct2bQ9ESL0 520 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Oxct2aQ9JJN4 520 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Slc6a21A0A1B0GSD2 748 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Klhl4B1AZR0 717 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Fignl2J3QK54 644 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Calhm3J3QMI4 347 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Gdf6P43028 454 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Ezh1P70351 747 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Spc25Q3UA16 226 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Sel1l2Q3V172 688 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Gm5800Q497L3 186 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Hist2h2acQ64523 129 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Hist2h2aa1Q6GSS7 130 aaKnown RBP12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 MogsQ80UM7 834 aaKnown RBP12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Slco6c1Q8C0X7 706 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Pphln1Q8K2H1 381 aaKnown RBP12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Mcoln3Q8R4F0 553 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Spns2Q91VM4 549 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 HnrnpabQ99020 285 aaKnown RBP12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 AadacQ99PG0 398 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Pard3bQ9CSB4 1203 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Gemin6Q9CX53 166 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Abcb9Q9JJ59 762 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Polr2jO08740 117 aaKnown RBP12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Matn2O08746 956 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Cd2P08920 344 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Btg3P50615 252 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Grin2cQ01098 1239 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Mvb12bQ6KAU4 317 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Znf569Q80W31 679 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Asz1Q8VD46 475 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Nck1Q99M51 377 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Zmat2Q9CPW7 199 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Ccdc77Q9CZH8 489 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Rnf138rt1Q9D9M9 248 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 PollQ9QXE2 573 aaKnown RBP12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 DgkeQ9R1C6 564 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Cdh22Q9WTP5 813 aa12.36□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Gm4450E9Q007 373 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Sox6P40645 827 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 DmpkP54265 631 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Rplp2P99027 115 aaKnown RBP12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Gpsm3Q3U1Z5 159 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Hsd3b4Q61767 373 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 UstQ8BUB6 407 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Tp53inp2Q8CFU8 221 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Mgrn1Q9D074 532 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Q9D979 236 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Rpl38Q9JJI8 70 aaKnown RBP12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Cngb3Q9JJZ9 694 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Ltbp2O08999 1813 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 HmbsP22907 361 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Ndst2P52850 883 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Cpne7Q0VE82 557 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Jak2Q62120 1129 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Pfkfb4Q6DTY7 469 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 RbfaQ6P3B9 350 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Trit1Q80UN9 467 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Ssh3Q8K330 649 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 PolbQ8K409 335 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Slc30a5Q8R4H9 761 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 NclnQ8VCM8 563 aaKnown RBP12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 GatbQ99JT1 557 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 St6galnac1Q9QZ39 526 aa12.35□□□□□ -0.43
Pdlim5-201ENSMUST00000029941 Asb1Q9WV74 336 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 116.2 ms