RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Slc13a3Q91Y63 600 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Rmnd5bQ91YQ7 393 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Rxfp2Q91ZZ5 737 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Nck1Q99M51 377 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Hnrnpa0Q9CX86 305 aaKnown RBP16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Il23aQ9EQ14 196 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Klhl18A0A0G2JGN5 579 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Vmn2r-ps130A0A140T8U3 855 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 4930558K02RikE0CXC6 182 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Ccdc62E9PVD1 701 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Prox1P48437 737 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Txnl4aP83877 142 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Nol9Q3TZX8 714 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 KrtdapQ3V2T4 102 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Syce1lQ5D525 247 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Mxd4Q60948 209 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Map3k10Q66L42 940 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Sox11Q7M6Y2 395 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Olfr1198Q7TR12 308 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Snx32Q80ZJ7 404 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Stk-ps2Q8C0V7 499 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 FcrlaQ920A9 352 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Clvs1Q9D4C9 354 aa16.44■□□□□ 0.22
Shh-201ENSMUST00000002708 Znf518bB2RRE4 1077 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Trim30bE9PVL6 203 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Gm2832F7AEC7 200 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Vmn2r67K7N6T2 851 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Pde9aO70628 534 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Psmd3P14685 530 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 AdprhP54923 362 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Cyp2c39P56656 490 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 St14P56677 855 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 YwhahP68510 246 aaKnown RBP16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Tex24Q5DP50 351 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Ccdc85aQ5SP85 500 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Lcp1Q61233 627 aaKnown RBP16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Krt73Q6NXH9 539 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Cpa4Q6P8K8 420 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Cfap97Q6ZPR1 541 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Olfr1128Q7TR47 311 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Dhx33Q80VY9 698 aaKnown RBP16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Aoc2Q812C9 757 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Mterf2Q8BKY8 385 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Clec1aQ8BWY2 269 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Mterf1aQ8CHZ9 379 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 St7Q99M96 577 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Snrpb2Q9CQI7 225 aaKnown RBP16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Gemin2Q9CQQ4 269 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Fbxl20Q9CZV8 436 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Klhdc8bQ9D2D9 354 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Tnfsf13Q9D777 241 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Gm4788E9Q8B5 879 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 F830016B08RikG3UWE2 416 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Rgs2O08849 211 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Hs3st1O35310 311 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Klk1b8P07628 261 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 BrafP28028 804 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 SykP48025 629 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 BmxP97504 651 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Col28a1Q2UY11 1141 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Sppl2bQ3TD49 578 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Hmgcll1Q8JZS7 343 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Impg1Q8R1W8 798 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Npffr2Q924H0 417 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Pole4Q9CQ36 118 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Rpl34Q9D1R9 117 aaKnown RBP16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Ttc25Q9D4B2 624 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 TrirQ9D735 173 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Kat2bQ9JHD1 813 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Ptk2bQ9QVP9 1009 aa16.43■□□□□ 0.22
Shh-201ENSMUST00000002708 Igkv5-45A0A0B4J1J1 115 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Agtr2P35374 363 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 AxlQ00993 888 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Usp22Q5DU02 525 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Slain1Q68FF7 579 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 ChpfQ6IQX7 774 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Stx5Q8K1E0 355 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Acap1Q8K2H4 740 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Rbmx2Q8R0F5 326 aaKnown RBP16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Tspan33Q8R3S2 283 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Oas1dQ8VI95 361 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Cyp2c70Q91W64 489 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Dctn2Q99KJ8 402 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Mat2bQ99LB6 334 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 CinpQ9D0V8 212 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Batf3Q9D275 118 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Fam83dQ9D7I8 585 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Gm12248A0A1W2P8B8 313 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 P01673 111 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Timm13P62075 95 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 StacP97306 403 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 F8a1Q00558 380 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Serpina3gQ5I2A0 440 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Tfap2cQ61312 449 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 DbhQ64237 622 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Naa50Q6PGB6 169 aaKnown RBP16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Trib2Q8K4K3 343 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Smad9Q9JIW5 430 aa16.42■□□□□ 0.22
Shh-201ENSMUST00000002708 Gm3147A0A0J9YU88 481 aa16.41■□□□□ 0.22
Shh-201ENSMUST00000002708 Gm10424A0A0J9YVD0 481 aa16.41■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms