RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 CD151P48509 253 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 SERPINB4P48594 390 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 CSNK1DP48730 415 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 CCNHP51946 323 aaPredicted RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 LIMK2P53671 638 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 SLC12A2P55011 1212 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 ST8SIA6P61647 398 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 MSLNQ13421 630 aaPredicted RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 ADAM15Q13444 863 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 GRM2Q14416 872 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 USP10Q14694 798 aaKnown RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 GRM3Q14832 879 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 PDGFRLQ15198 375 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 TAF1AQ15573 450 aaPredicted RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 GEN1Q17RS7 908 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 MYLK3Q32MK0 819 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 CARD16Q5EG05 197 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 ATG16L1Q676U5 607 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 GRAMD4Q6IC98 578 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 FSTL4Q6MZW2 842 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 KYAT3Q6YP21 454 aaKnown RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 Q6ZVU0 165 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 TBC1D1Q86TI0 1168 aaPredicted RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 ADIPOR2Q86V24 386 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 SLC41A1Q8IVJ1 513 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 CPA6Q8N4T0 437 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 PCDH20Q8N6Y1 951 aaKnown RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 GPATCH11Q8N954 259 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 OR4K2Q8NGD2 314 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 OR13C4Q8NGS5 318 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 OR13J1Q8NGT2 312 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 WFIKKN2Q8TEU8 576 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 STON2Q8WXE9 905 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 SORCS1Q8WY21 1168 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 ERP27Q96DN0 273 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 ASIC4Q96FT7 647 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 VPS39Q96JC1 886 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 ELMO2Q96JJ3 720 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 TBATAQ96M53 351 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 TSNARE1Q96NA8 513 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 FAM111AQ96PZ2 611 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 MYADMQ96S97 322 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 SRPK1Q96SB4 655 aaKnown RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 KXD1Q9BQD3 176 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 TSSK1BQ9BXA7 367 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 MYLK2Q9H1R3 596 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 C12orf65Q9H3J6 166 aaKnown RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 RHOJQ9H4E5 214 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 SUDS3Q9H7L9 328 aaPredicted RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 BPIFA1Q9NP55 256 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 SNX15Q9NRS6 342 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 KCNK4Q9NYG8 393 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 NOP53Q9NZM5 478 aaKnown RBP8.87□□□□□ -0.99
PHGDH-219ENST00000641513 HACD3Q9P035 362 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 SIRPGQ9P1W8 387 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 SLCO3A1Q9UIG8 710 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 GGT7Q9UJ14 662 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 MCM8Q9UJA3 840 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 FBXO5Q9UKT4 447 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 SORCS3Q9UPU3 1222 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 HS3ST2Q9Y278 367 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 ZNF711Q9Y462 761 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 COL4A3Q01955 1670 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 PIKFYVEQ9Y2I7 2098 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 CHD9Q3L8U1 2897 aa8.87□□□□□ -0.99
PHGDH-219ENST00000641513 FAM95CA0A1B0GW59 222 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 HMX2A2RU54 273 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 A8MX80 341 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 CD3EAPO15446 510 aaKnown RBP8.86□□□□□ -0.99
PHGDH-219ENST00000641513 SLC7A4O43246 635 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 HOXC11O43248 304 aaPredicted RBP8.86□□□□□ -0.99
PHGDH-219ENST00000641513 GLRA3O75311 464 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 TULP3O75386 442 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 POP4O95707 220 aaKnown RBP8.86□□□□□ -0.99
PHGDH-219ENST00000641513 GOT2P00505 430 aaKnown RBP8.86□□□□□ -0.99
PHGDH-219ENST00000641513 AHSGP02765 367 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 MPOP05164 745 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 ALPIP09923 528 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 ARNTP27540 789 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 PTPN4P29074 926 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 PMLP29590 882 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 CRHR1P34998 444 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 MTHFRP42898 656 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 GRIA4P48058 902 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 SLC6A11P48066 632 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 ARSDP51689 593 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 KCNJ2P63252 427 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 IRX4P78413 519 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 PTPRRQ15256 657 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 INSCQ1MX18 579 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 FNDC3BQ53EP0 1204 aaKnown RBP8.86□□□□□ -0.99
PHGDH-219ENST00000641513 FASTKD1Q53R41 847 aaKnown RBP8.86□□□□□ -0.99
PHGDH-219ENST00000641513 TAF1BQ53T94 588 aaPredicted RBP8.86□□□□□ -0.99
PHGDH-219ENST00000641513 MRNIPQ6NTE8 343 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 VITQ6UXI7 678 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 FAM47EQ6ZV65 393 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 CLNKQ7Z7G1 428 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 CMC1Q7Z7K0 106 aa8.86□□□□□ -0.99
PHGDH-219ENST00000641513 SDCCAG8Q86SQ7 713 aaPredicted RBP8.86□□□□□ -0.99
PHGDH-219ENST00000641513 LDB1Q86U70 411 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms