RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 SNAP23O00161 211 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 P2RY10O00398 339 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 SLC22A3O75751 556 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 TFP02787 698 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 IFIT1P09914 478 aaKnown RBP4.75□□□□□ -1.65
CCDC7-216ENST00000640058 MCM3P25205 808 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 IL15P40933 162 aaPredicted RBP4.75□□□□□ -1.65
CCDC7-216ENST00000640058 SEC61BP60468 96 aaKnown RBP4.75□□□□□ -1.65
CCDC7-216ENST00000640058 UFM1P61960 85 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 SORDQ00796 357 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 DMP1Q13316 513 aaPredicted RBP4.75□□□□□ -1.65
CCDC7-216ENST00000640058 RBM39Q14498 530 aaKnown RBP4.75□□□□□ -1.65
CCDC7-216ENST00000640058 RNPS1Q15287 305 aaKnown RBP4.75□□□□□ -1.65
CCDC7-216ENST00000640058 HIST2H2ACQ16777 129 aaPredicted RBP4.75□□□□□ -1.65
CCDC7-216ENST00000640058 SYT16Q17RD7 645 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 MRGPRG-AS1Q2M3A8 158 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 LINGO2Q7L985 606 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 SLC26A9Q7LBE3 791 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 RRM2BQ7LG56 351 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 OR2AK2Q8NG84 335 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 HUS1BQ8NHY5 278 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 ZBTB10Q96DT7 871 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 KIF1BPQ96EK5 621 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 KCNN2Q9H2S1 579 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 NDST4Q9H3R1 872 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 TMEM160Q9NX00 188 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 POU2F3Q9UKI9 436 aa4.75□□□□□ -1.65
CCDC7-216ENST00000640058 RALYQ9UKM9 306 aaKnown RBP4.75□□□□□ -1.65
CCDC7-216ENST00000640058 FAM172BPA6NC97 362 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 ERVV-2B6SEH9 535 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 TNPO2O14787 897 aaKnown RBP4.74□□□□□ -1.65
CCDC7-216ENST00000640058 FGF17O60258 216 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 POLBP06746 335 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 HNRNPA1P09651 372 aaKnown RBP eCLIP4.74□□□□□ -1.65
CCDC7-216ENST00000640058 ITGA2P17301 1181 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 HILS1P60008 231 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 GPATCH4Q5T3I0 446 aaKnown RBP4.74□□□□□ -1.65
CCDC7-216ENST00000640058 TXNDC8Q6A555 127 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 MARK2Q7KZI7 788 aaKnown RBP4.74□□□□□ -1.65
CCDC7-216ENST00000640058 DSG4Q86SJ6 1040 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 TMEM219Q86XT9 240 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 CHERPQ8IWX8 916 aaKnown RBP4.74□□□□□ -1.65
CCDC7-216ENST00000640058 ZNF34Q8IZ26 560 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 USP13Q92995 863 aaPredicted RBP4.74□□□□□ -1.65
CCDC7-216ENST00000640058 GCC1Q96CN9 775 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 PABPC5Q96DU9 382 aaKnown RBP4.74□□□□□ -1.65
CCDC7-216ENST00000640058 MAELQ96JY0 434 aaKnown RBP4.74□□□□□ -1.65
CCDC7-216ENST00000640058 KLHL15Q96M94 604 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 CMKLR1Q99788 373 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 ABCF3Q9NUQ8 709 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 HCN3Q9P1Z3 774 aa4.74□□□□□ -1.65
CCDC7-216ENST00000640058 GAGE10A6NGK3 116 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 IFRD1O00458 451 aaPredicted RBP4.73□□□□□ -1.65
CCDC7-216ENST00000640058 MARK3P27448 753 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 FMO5P49326 533 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 CLCNKAP51800 687 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 RPP30P78346 268 aaKnown RBP4.73□□□□□ -1.65
CCDC7-216ENST00000640058 GALNT2Q10471 571 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 ACCSLQ4AC99 568 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 SLC9B1Q4ZJI4 515 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 KCNT1Q5JUK3 1230 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 PMS2CLQ68D20 193 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.73□□□□□ -1.65
CCDC7-216ENST00000640058 KCTD18Q6PI47 426 aaPredicted RBP4.73□□□□□ -1.65
CCDC7-216ENST00000640058 GFRALQ6UXV0 394 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 SPATA6LQ8N4H0 392 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 DMBX1Q8NFW5 382 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 UBXN10Q96LJ8 280 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 PGLYRP2Q96PD5 576 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 GLIS2Q9BZE0 524 aaPredicted RBP4.73□□□□□ -1.65
CCDC7-216ENST00000640058 PPP1R3EQ9H7J1 279 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 MCM9Q9NXL9 1143 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 TAAR2Q9P1P5 351 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 PADI1Q9ULC6 663 aa4.73□□□□□ -1.65
CCDC7-216ENST00000640058 AKR1B15C9JRZ8 316 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-216ENST00000640058 LDLRAD4O15165 306 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 IRF1P10914 325 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 COX7A2P14406 83 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 MAOAP21397 527 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 GNL1P36915 607 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-216ENST00000640058 METAP2P50579 478 aaKnown RBP eCLIP4.72□□□□□ -1.65
CCDC7-216ENST00000640058 HNRNPH2P55795 449 aaKnown RBP4.72□□□□□ -1.65
CCDC7-216ENST00000640058 NAE1Q13564 534 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 STXBP5Q5T5C0 1151 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 QSOX2Q6ZRP7 698 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 WDR63Q8IWG1 891 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 ABTB1Q969K4 478 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-216ENST00000640058 SCLT1Q96NL6 688 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 PCYT2Q99447 389 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 FUZQ9BT04 418 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 PCDH9Q9HC56 1237 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 FBRSL1Q9HCM7 1045 aaKnown RBP4.72□□□□□ -1.65
CCDC7-216ENST00000640058 ZNF334Q9HCZ1 680 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-216ENST00000640058 SCRT2Q9NQ03 307 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 HINT3Q9NQE9 182 aaKnown RBP4.72□□□□□ -1.65
CCDC7-216ENST00000640058 SLC25A10Q9UBX3 287 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-216ENST00000640058 AMDHD2Q9Y303 409 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 DGKBQ9Y6T7 804 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 WDR81Q562E7 1941 aa4.72□□□□□ -1.65
CCDC7-216ENST00000640058 ASPDHA6ND91 283 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms