RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 PDHA1P08559 390 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 APLP1P51693 650 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 AP2B1P63010 937 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 DSG1Q02413 1049 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 TLE2Q04725 743 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 ILF2Q12905 390 aaKnown RBP21.52■■□□□ 1.04
CLN6-224ENST00000638076 CXorf57Q6NSI4 855 aaKnown RBP21.52■■□□□ 1.04
CLN6-224ENST00000638076 CUZD1Q86UP6 607 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 OR4K2Q8NGD2 314 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 RP9Q8TA86 221 aaKnown RBP21.52■■□□□ 1.04
CLN6-224ENST00000638076 PTERQ96BW5 349 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 FAM136AQ96C01 138 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 CCDC124Q96CT7 223 aaKnown RBP21.52■■□□□ 1.04
CLN6-224ENST00000638076 TRMT2BQ96GJ1 504 aaKnown RBP21.52■■□□□ 1.04
CLN6-224ENST00000638076 SMIM14Q96QK8 99 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 TNFRSF12AQ9NP84 129 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 ANGPTL2Q9UKU9 493 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 PCDHGC4Q9Y5F7 938 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 SCAMP3O14828 347 aaKnown RBP21.52■■□□□ 1.04
CLN6-224ENST00000638076 AIM2O14862 343 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 SLC22A2O15244 555 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 CD1DP15813 335 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 VEPH1Q14D04 833 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 TRIM60Q495X7 471 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 TRIM68Q6AZZ1 485 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 TMCO2Q7Z6W1 182 aaPredicted RBP21.52■■□□□ 1.04
CLN6-224ENST00000638076 EFCAB3Q8N7B9 438 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 TMEM169Q96HH4 297 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 ZNF333Q96JL9 665 aa21.52■■□□□ 1.04
CLN6-224ENST00000638076 C1RP00736 705 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 ANPEPP15144 967 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 HOXB8P17481 243 aaPredicted RBP21.51■■□□□ 1.03
CLN6-224ENST00000638076 IMPDH1P20839 514 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 ATP6V1C1P21283 382 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 NUDT2P50583 147 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 CLNS1AP54105 237 aaKnown RBP21.51■■□□□ 1.03
CLN6-224ENST00000638076 ARF5P84085 180 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 TWF1Q12792 350 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 CYLC2Q14093 348 aaPredicted RBP21.51■■□□□ 1.03
CLN6-224ENST00000638076 TAF1AQ15573 450 aaPredicted RBP21.51■■□□□ 1.03
CLN6-224ENST00000638076 TYSND1Q2T9J0 566 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 HPS6Q86YV9 775 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 FBXW8Q8N3Y1 598 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 RYBPQ8N488 228 aaPredicted RBP21.51■■□□□ 1.03
CLN6-224ENST00000638076 LPCAT1Q8NF37 534 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 PRRG1O14668 218 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 F11P03951 625 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 ADSLP30566 484 aaPredicted RBP21.51■■□□□ 1.03
CLN6-224ENST00000638076 FAM117BQ6P1L5 589 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 LINGO4Q6UY18 593 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 CEP70Q8NHQ1 597 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 CYP2S1Q96SQ9 504 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 AARSD1Q9BTE6 412 aaKnown RBP21.51■■□□□ 1.03
CLN6-224ENST00000638076 GSTO2Q9H4Y5 243 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 ZBTB26Q9HCK0 441 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 RAI2Q9Y5P3 530 aa21.51■■□□□ 1.03
CLN6-224ENST00000638076 COPG1Q9Y678 874 aaKnown RBP21.51■■□□□ 1.03
CLN6-224ENST00000638076 UBA6A0AVT1 1052 aaPredicted RBP21.5■■□□□ 1.03
CLN6-224ENST00000638076 SNAP91O60641 907 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 MBL2P11226 248 aaPredicted RBP21.5■■□□□ 1.03
CLN6-224ENST00000638076 ZNF37AP17032 561 aaPredicted RBP21.5■■□□□ 1.03
CLN6-224ENST00000638076 SUOXP51687 545 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 ZRSR2Q15696 482 aaKnown RBP21.5■■□□□ 1.03
CLN6-224ENST00000638076 CNKSR3Q6P9H4 555 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 DNAJB7Q7Z6W7 309 aaPredicted RBP21.5■■□□□ 1.03
CLN6-224ENST00000638076 PLCD3Q8N3E9 789 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 EXT2Q93063 718 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 FAR2Q96K12 515 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 TTC1Q99614 292 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 DDX50Q9BQ39 737 aaKnown RBP21.5■■□□□ 1.03
CLN6-224ENST00000638076 ZBED2Q9BTP6 218 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 POLR3BQ9NW08 1133 aaPredicted RBP21.5■■□□□ 1.03
CLN6-224ENST00000638076 C2orf81A6NN90 581 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 FKBP6O75344 327 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 SUPT7LO94864 414 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 CD160O95971 181 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 CES1P23141 567 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 SATB1Q01826 763 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 GALNT1Q10472 559 aaPredicted RBP21.5■■□□□ 1.03
CLN6-224ENST00000638076 PDAP1Q13442 181 aaKnown RBP21.5■■□□□ 1.03
CLN6-224ENST00000638076 TCHHL1Q5QJ38 904 aaPredicted RBP21.5■■□□□ 1.03
CLN6-224ENST00000638076 ZNF678Q5SXM1 525 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 HERC6Q8IVU3 1022 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 SLC39A11Q8N1S5 342 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 AFAP1L2Q8N4X5 818 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 ZNF558Q96NG5 402 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 POPDC3Q9HBV1 291 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 TRPC7Q9HCX4 862 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 INTS10Q9NVR2 710 aaKnown RBP21.5■■□□□ 1.03
CLN6-224ENST00000638076 PPM1HQ9ULR3 514 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 POMPQ9Y244 141 aa21.5■■□□□ 1.03
CLN6-224ENST00000638076 TMCC1O94876 653 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 ACADSP16219 412 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 MTTPP55157 894 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 C1QTNF8P60827 252 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 SMAD3P84022 425 aaKnown RBP21.49■■□□□ 1.03
CLN6-224ENST00000638076 AFTPHQ6ULP2 937 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 TMEM150AQ86TG1 271 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 CARNMT1Q8N4J0 409 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 MAB21L3Q8N8X9 362 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms