RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 NMUR2Q9GZQ4 415 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 CHD7Q9P2D1 2997 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 EMCNQ9ULC0 261 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 MAFFQ9ULX9 164 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 C5orf42Q9H799 3197 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 LCHNA4D1U4 455 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 HNRNPCL1O60812 293 aaKnown RBP11.55□□□□□ -0.56
CLN6-217ENST00000636964 LILRB3O75022 631 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 DNAJC6O75061 913 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 PGM3O95394 542 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 AHSGP02765 367 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 RHOCP08134 193 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 EN2P19622 333 aaPredicted RBP11.55□□□□□ -0.56
CLN6-217ENST00000636964 VARSP26640 1264 aaKnown RBP11.55□□□□□ -0.56
CLN6-217ENST00000636964 GABRB3P28472 473 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 RGRP47804 291 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 LIMK2P53671 638 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 TUBA1BP68363 451 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 TMPRSS15P98073 1019 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 NAB1Q13506 487 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 GALNT3Q14435 633 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 PTPRCAPQ14761 206 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 GRM3Q14832 879 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 LRRC36Q1X8D7 754 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 SLC44A4Q53GD3 710 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 FSCBQ5H9T9 825 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 SIRPB2Q5JXA9 342 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 RNF219Q5W0B1 726 aaPredicted RBP11.55□□□□□ -0.56
CLN6-217ENST00000636964 POTEHQ6S545 545 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 ACAD11Q709F0 780 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 TUBA1AQ71U36 451 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 GAREM2Q75VX8 874 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 SPRED2Q7Z698 418 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 PDSS2Q86YH6 399 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 CARNMT1Q8N4J0 409 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 METTL25Q8N6Q8 603 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 VPS39Q96JC1 886 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 CCDC28BQ9BUN5 200 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 DRC3Q9H069 523 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 IL21Q9HBE4 155 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 ATP13A1Q9HD20 1204 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 TMEM216Q9P0N5 145 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 SLC7A8Q9UHI5 535 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 CPQQ9Y646 472 aa11.55□□□□□ -0.56
CLN6-217ENST00000636964 HTR3EA5X5Y0 456 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 SORBS2O94875 1100 aaKnown RBP11.54□□□□□ -0.56
CLN6-217ENST00000636964 CDK4P11802 303 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 PCSK6P29122 969 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 PPM1AP35813 382 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 SERPINH1P50454 418 aaKnown RBP11.54□□□□□ -0.56
CLN6-217ENST00000636964 CAMK2BQ13554 666 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 LPCAT4Q643R3 524 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 PDPK2PQ6A1A2 396 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 TNS4Q8IZW8 715 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 PAF1Q8N7H5 531 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 RBM15BQ8NDT2 890 aaKnown RBP11.54□□□□□ -0.56
CLN6-217ENST00000636964 ZNF398Q8TD17 642 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 SLC22A17Q8WUG5 538 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 ZFRQ96KR1 1074 aaKnown RBP11.54□□□□□ -0.56
CLN6-217ENST00000636964 UNKQ9C0B0 810 aaKnown RBP11.54□□□□□ -0.56
CLN6-217ENST00000636964 POLR1EQ9GZS1 481 aaKnown RBP11.54□□□□□ -0.56
CLN6-217ENST00000636964 ZBP1Q9H171 429 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 MRPL46Q9H2W6 279 aaKnown RBP11.54□□□□□ -0.56
CLN6-217ENST00000636964 ANAPC1Q9H1A4 1944 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 AURKAO14965 403 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 SNAP91O60641 907 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 TBL1XO60907 577 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 EFCAB14O75071 495 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 LINC00271P0C7V0 271 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 CCDC166P0CW27 439 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 CTSAP10619 480 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 SYN1P17600 705 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 ARCN1P48444 511 aaKnown RBP11.54□□□□□ -0.56
CLN6-217ENST00000636964 ERVFC1P60507 584 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 BST1Q10588 318 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 C5orf22Q49AR2 442 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 MIA3Q5JRA6 1907 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 RIN3Q8TB24 985 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 PPP2R3CQ969Q6 453 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 NSMCE3Q96MG7 304 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 SMG9Q9H0W8 520 aaKnown RBP11.54□□□□□ -0.56
CLN6-217ENST00000636964 MAGEH1Q9H213 219 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 PDFQ9HBH1 243 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 INIPQ9NRY2 104 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 PLK2Q9NYY3 685 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 ARIH1Q9Y4X5 557 aaPredicted RBP11.54□□□□□ -0.56
CLN6-217ENST00000636964 PTPRSQ13332 1948 aa11.54□□□□□ -0.56
CLN6-217ENST00000636964 A0A096LPK6 155 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 HIDE1A8MVS5 230 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 CAPN14A8MX76 684 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 PHGDHO43175 533 aaKnown RBP11.53□□□□□ -0.56
CLN6-217ENST00000636964 CLDN11O75508 207 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 C1RP00736 705 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 CKMP06732 381 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 KITP10721 976 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 CCT8P50990 548 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 AQP4P55087 323 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 ZNF460Q14592 562 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 ALKBH2Q6NS38 261 aa11.53□□□□□ -0.56
CLN6-217ENST00000636964 LDB1Q86U70 411 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms