RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 ME2P23368 584 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 ATP2B4P23634 1241 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 EEF1B2P24534 225 aaKnown RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 DNAJB1P25685 340 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 IVDP26440 423 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 CALML3P27482 149 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 PBLDP30039 288 aaPredicted RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 ADSSP30520 456 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 SSTR3P32745 418 aaPredicted RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 ACSL1P33121 698 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 MCM7P33993 719 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 EPHX2P34913 555 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 CTNNB1P35222 781 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 ADD2P35612 726 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 SOX6P35712 828 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 NUP62P37198 522 aaPredicted RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 CAPGP40121 348 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 EIF2S3P41091 472 aaKnown RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 EIF1P41567 113 aaKnown RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 GRM5P41594 1212 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 RPL35P42766 123 aaKnown RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 GSTM5P46439 218 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 QARSP47897 775 aaKnown RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 ARCN1P48444 511 aaKnown RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 PCP4P48539 62 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 PSMD8P48556 350 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 ACOT2P49753 483 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 NT5C2P49902 561 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 NUDT2P50583 147 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 RNF144AP50876 292 aaPredicted RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 CLCN4P51793 760 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 AKR1D1P51857 326 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 ARFIP1P53367 373 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 MAPK10P53779 464 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 PLA2G16P53816 162 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 GALCP54803 685 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 UGT2B15P54855 530 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 AQP5P55064 265 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 RAB25P57735 213 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 KCNK10P57789 538 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 GPX6P59796 221 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 SPCS3P61009 180 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 ACTR2P61160 394 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 ABCE1P61221 599 aaKnown RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 AP1S1P61966 158 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 ERVK-8P63133 956 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 UBE2IP63279 158 aaKnown RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 NKX3-2P78367 333 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 MPP1Q00013 466 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 CNTN2Q02246 1040 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 GCNT1Q02742 428 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 PTPN12Q05209 780 aaKnown RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 ZNF91Q05481 1191 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 SLC18A2Q05940 514 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 PUDPQ08623 228 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 BST1Q10588 318 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 MERTKQ12866 999 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 EPS8Q12929 822 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 PDIA2Q13087 525 aaKnown RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 CHAF1BQ13112 559 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 DUSP4Q13115 394 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 STX5Q13190 355 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 PTGDRQ13258 359 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 NR5A1Q13285 461 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 ZNF211Q13398 564 aaPredicted RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 TUBB3Q13509 450 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 GPR50Q13585 617 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 GRAPQ13588 217 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 EFR3AQ14156 821 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 UBAP2LQ14157 1087 aaKnown RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 CAPRIN1Q14444 709 aaKnown RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 ZNF169Q14929 603 aaPredicted RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 ACOX1Q15067 660 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 NCF4Q15080 339 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 PPA1Q15181 289 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 PCBP1Q15365 356 aaKnown RBP eCLIP1.92□□□□□ -2.1
TCF4-264ENST00000628391 SEC23AQ15436 765 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 ATP6AP1Q15904 470 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 CARTPTQ16568 116 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 CTF1Q16619 201 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 NRF1Q16656 503 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 CA9Q16790 459 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 RTN1Q16799 776 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 DUSP6Q16828 381 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 GEN1Q17RS7 908 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 COL28A1Q2UY09 1125 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 EIF2S3LQ2VIR3 472 aaKnown RBP1.92□□□□□ -2.1
TCF4-264ENST00000628391 BTBD16Q32M84 506 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 SUPT20HL1Q3ZLR7 823 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 ZACNQ401N2 412 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 SLC36A3Q495N2 470 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 SPATS1Q496A3 300 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 GPR33Q49SQ1 333 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 LRRC24Q50LG9 513 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 GPAT3Q53EU6 434 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 KLHL12Q53G59 568 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 Q5BKY6 102 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 PIGGQ5H8A4 983 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 MTX3Q5HYI7 312 aa1.92□□□□□ -2.1
TCF4-264ENST00000628391 CLLU1Q5K131 121 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms