RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 FMO4P31512 558 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 ANKRD23Q86SG2 305 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 SCUBE3Q8IX30 993 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 KBTBD7Q8WVZ9 684 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 CELF6Q96J87 481 aaKnown RBP8.92□□□□□ -0.98
VCL-206ENST00000623461 DMRTB1Q96MA1 342 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 NSMCE3Q96MG7 304 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 GSDMCQ9BYG8 508 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 VPS4AQ9UN37 437 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 C3P01024 1663 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 DHX15O43143 795 aaKnown RBP8.92□□□□□ -0.98
VCL-206ENST00000623461 FAM155BO75949 473 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 PIH1D2Q8WWB5 315 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 NACC2Q96BF6 587 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 BTRCQ9Y297 605 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 RBM47A0AV96 593 aaKnown RBP8.92□□□□□ -0.98
VCL-206ENST00000623461 GABBR2O75899 941 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 SLC25A27O95847 323 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 NOS3P29474 1203 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 ACSM2AQ08AH3 577 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 CDH18Q13634 790 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 SPATS1Q496A3 300 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 ACSM2BQ68CK6 577 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 OGFOD2Q6N063 350 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 GALNT12Q8IXK2 581 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 GTF3C2Q8WUA4 911 aaPredicted RBP8.92□□□□□ -0.98
VCL-206ENST00000623461 MFSD14AQ96MC6 490 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 LHX5Q9H2C1 402 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 POPDC2Q9HBU9 364 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 GMIPQ9P107 970 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 KLQ9UEF7 1012 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 IRAK3Q9Y616 596 aa8.92□□□□□ -0.98
VCL-206ENST00000623461 CDKN2BP42772 138 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 CRATP43155 626 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 RPL7AP62424 266 aaKnown RBP8.91□□□□□ -0.98
VCL-206ENST00000623461 SLC34A3Q8N130 599 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 NXF3Q9H4D5 531 aaKnown RBP8.91□□□□□ -0.98
VCL-206ENST00000623461 EVA1BQ9NVM1 165 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 DNAJB9Q9UBS3 223 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 CRYL1Q9Y2S2 319 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 MFHAS1Q9Y4C4 1052 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 MST1RQ04912 1400 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 ELOVL7A1L3X0 281 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 GRIN3BO60391 1043 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 DNAJB5O75953 348 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 FTH1P02794 183 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 RAP2AP10114 183 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 CXCL8P10145 99 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 ABCG1P45844 678 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 RORCP51449 518 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 LIMK2P53671 638 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 AP3S2P59780 193 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 ADIGQ0VDE8 80 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 LAMTOR4Q0VGL1 99 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 GNA13Q14344 377 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 AMHR2Q16671 573 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 DDI2Q5TDH0 399 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 VWA5B1Q5TIE3 1220 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 GLT6D1Q7Z4J2 308 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 CMC1Q7Z7K0 106 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 PEG10Q86TG7 708 aaKnown RBP8.91□□□□□ -0.98
VCL-206ENST00000623461 OR5K1Q8NHB7 308 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 PTCD2Q8WV60 388 aaKnown RBP8.91□□□□□ -0.98
VCL-206ENST00000623461 ZNF696Q9H7X3 374 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 ACP6Q9NPH0 428 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 SPACA6W5XKT8 324 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 MYH13Q9UKX3 1938 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 ARL13AQ5H913 290 aaPredicted RBP8.91□□□□□ -0.98
VCL-206ENST00000623461 ANXA8L1Q5VT79 327 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 FAM183BPQ6ZVS7 135 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 GPR180Q86V85 440 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 TTLL6Q8N841 843 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 SELENOMQ8WWX9 145 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 GLT1D1Q96MS3 346 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 OR52E6Q96RD3 313 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 PDP1Q9P0J1 537 aaPredicted RBP8.91□□□□□ -0.98
VCL-206ENST00000623461 ERVK-11Q9UQG0 969 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 CFL2Q9Y281 166 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 MRPS7Q9Y2R9 242 aaKnown RBP8.91□□□□□ -0.98
VCL-206ENST00000623461 CENPBD1B2RD01 187 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 SLC30A4O14863 429 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 POU5F1Q01860 360 aaKnown RBP8.91□□□□□ -0.98
VCL-206ENST00000623461 AKIRIN2Q53H80 203 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 FBXO47Q5MNV8 452 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 CHMP1BQ7LBR1 199 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 PM20D2Q8IYS1 436 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 ZNF781Q8N8C0 355 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 SMG8Q8ND04 991 aaKnown RBP8.91□□□□□ -0.98
VCL-206ENST00000623461 ISOC1Q96CN7 298 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 MAN2B2Q9Y2E5 1009 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 RGL2O15211 777 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 ULK1O75385 1050 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 ASS1P00966 412 aaKnown RBP8.91□□□□□ -0.98
VCL-206ENST00000623461 ERCC2P18074 760 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 ENTPD1P49961 510 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 MON1BQ7L1V2 547 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 SLC26A9Q7LBE3 791 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 UNC93AQ86WB7 457 aa8.91□□□□□ -0.98
VCL-206ENST00000623461 TRUB1Q8WWH5 349 aaKnown RBP8.91□□□□□ -0.98
VCL-206ENST00000623461 WNT8BQ93098 351 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms