RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 ZNF865P0CJ78 1059 aaPredicted RBP13.27□□□□□ -0.28
SIRPA-204ENST00000622179 SELPP16109 830 aa13.27□□□□□ -0.28
SIRPA-204ENST00000622179 CCND3P30281 292 aaPredicted RBP13.27□□□□□ -0.28
SIRPA-204ENST00000622179 ACVRL1P37023 503 aa13.27□□□□□ -0.28
SIRPA-204ENST00000622179 NDST2P52849 883 aa13.27□□□□□ -0.28
SIRPA-204ENST00000622179 ACTR3P61158 418 aa13.27□□□□□ -0.28
SIRPA-204ENST00000622179 UPP1Q16831 310 aa13.27□□□□□ -0.28
SIRPA-204ENST00000622179 POM121L1PQ3SYA9 428 aa13.27□□□□□ -0.28
SIRPA-204ENST00000622179 TIGD2Q4W5G0 525 aa13.27□□□□□ -0.28
SIRPA-204ENST00000622179 APLFQ8IW19 511 aaPredicted RBP13.27□□□□□ -0.28
SIRPA-204ENST00000622179 CENPLQ8N0S6 344 aaPredicted RBP13.27□□□□□ -0.28
SIRPA-204ENST00000622179 UCMAQ8WVF2 138 aa13.27□□□□□ -0.28
SIRPA-204ENST00000622179 EBF2Q9HAK2 575 aa13.27□□□□□ -0.28
SIRPA-204ENST00000622179 CLIC5Q9NZA1 410 aa13.27□□□□□ -0.28
SIRPA-204ENST00000622179 CORO1CQ9ULV4 474 aaPredicted RBP13.27□□□□□ -0.28
SIRPA-204ENST00000622179 Q9Y3F1 56 aa13.27□□□□□ -0.28
SIRPA-204ENST00000622179 KCTD3Q9Y597 815 aa13.27□□□□□ -0.28
SIRPA-204ENST00000622179 ZNF487B1APH4 448 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 CA12O43570 354 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 ACSL4O60488 711 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 CLDN11O75508 207 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 KRT6AP02538 564 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 KRT6BP04259 564 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 KRT6CP48668 564 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 PIK3CGP48736 1102 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 CHN2P52757 468 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 HK2P52789 917 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 GSCP56915 257 aaPredicted RBP13.27□□□□□ -0.29
SIRPA-204ENST00000622179 TRIP4Q15650 581 aaPredicted RBP13.27□□□□□ -0.29
SIRPA-204ENST00000622179 VPS26BQ4G0F5 336 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 SLC2A13Q96QE2 648 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 FAM126AQ9BYI3 521 aaPredicted RBP13.27□□□□□ -0.29
SIRPA-204ENST00000622179 ZDHHC6Q9H6R6 413 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 GKN1Q9NS71 199 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 LIMD1Q9UGP4 676 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 GABRQQ9UN88 632 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 PSMD13Q9UNM6 376 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 TLR6Q9Y2C9 796 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 CLOCKO15516 846 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 ZBTB14O43829 449 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 PARNO95453 639 aaKnown RBP13.27□□□□□ -0.29
SIRPA-204ENST00000622179 HTR7P34969 479 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 KCNQ1P51787 676 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 NOGQ13253 232 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 PRMT9Q6P2P2 845 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 GPRIN3Q6ZVF9 776 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 STK32CQ86UX6 486 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 STK40Q8N2I9 435 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 OLIG1Q8TAK6 271 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 FAM120BQ96EK7 910 aaKnown RBP13.27□□□□□ -0.29
SIRPA-204ENST00000622179 TRMOQ9BU70 441 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 PPM1HQ9ULR3 514 aa13.27□□□□□ -0.29
SIRPA-204ENST00000622179 TMEM247A6NEH6 219 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 OAS1P00973 400 aaKnown RBP13.26□□□□□ -0.29
SIRPA-204ENST00000622179 CKBP12277 381 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 PTPRCAPQ14761 206 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 ARHGAP15Q53QZ3 475 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 PITRM1Q5JRX3 1037 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 ELMSAN1Q6PJG2 1045 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 OR10T2Q8NGX3 314 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 DEFB118Q96PH6 123 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 SIX3O95343 332 aaPredicted RBP13.26□□□□□ -0.29
SIRPA-204ENST00000622179 EOMESO95936 686 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 LDLRP01130 860 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 SERPINA4P29622 427 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 OCA2Q04671 838 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 ACAP2Q15057 778 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 CRY1Q16526 586 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 UBXN11Q5T124 520 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 UPF1Q92900 1129 aaKnown RBP eCLIP13.26□□□□□ -0.296e-6■■■■□ 21.9
SIRPA-204ENST00000622179 MED8Q96G25 268 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 RMND5BQ96G75 393 aaPredicted RBP13.26□□□□□ -0.29
SIRPA-204ENST00000622179 SPATA17Q96L03 361 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 FLRT1Q9NZU1 646 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 NDUFA13Q9P0J0 144 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 C6orf203Q9P0P8 240 aaPredicted RBP13.26□□□□□ -0.29
SIRPA-204ENST00000622179 AP4B1Q9Y6B7 739 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 UBR3Q6ZT12 1888 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 STX16-NPEPL1H3BU86 382 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 VPS4BO75351 444 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 PKMP14618 531 aaKnown RBP13.26□□□□□ -0.29
SIRPA-204ENST00000622179 ETS2P15036 469 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 BLMHQ13867 455 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 ZNF284Q2VY69 593 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 DEFB115Q30KQ5 88 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 PAOXQ6QHF9 649 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 MAB21L3Q8N8X9 362 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 VPS37AQ8NEZ2 397 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 ZNF558Q96NG5 402 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 ZNF570Q96NI8 536 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 GPR22Q99680 433 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 CCDC28BQ9BUN5 200 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 SPATA16Q9BXB7 569 aa13.26□□□□□ -0.29
SIRPA-204ENST00000622179 MRPL17Q9NRX2 175 aaKnown RBP13.26□□□□□ -0.29
SIRPA-204ENST00000622179 CCDC162PA2VCL2 907 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 PRR23AA6NEV1 266 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 SLC7A4O43246 635 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 MLYCDO95822 493 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 IL10RBQ08334 325 aa13.25□□□□□ -0.29
SIRPA-204ENST00000622179 VAC14Q08AM6 782 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms