RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 FBRSL1Q9HCM7 1045 aaKnown RBP6.61□□□□□ -1.35
LPCAT3-213ENST00000620843 NDRG3Q9UGV2 375 aa6.61□□□□□ -1.35
LPCAT3-213ENST00000620843 VPS28Q9UK41 221 aa6.61□□□□□ -1.35
LPCAT3-213ENST00000620843 ADAM18Q9Y3Q7 739 aa6.61□□□□□ -1.35
LPCAT3-213ENST00000620843 TOPAZ1Q8N9V7 1692 aa6.61□□□□□ -1.35
LPCAT3-213ENST00000620843 THSD7AQ9UPZ6 1657 aa6.61□□□□□ -1.35
LPCAT3-213ENST00000620843 DLC1Q96QB1 1528 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 CCDC144AA2RUR9 1427 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 ARHGEF28Q8N1W1 1705 aaKnown RBP6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 TMEM272A0A1B0GTI8 110 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 A0A1W2PQF6 199 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 BCAT2O15382 392 aaPredicted RBP6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 SEC14L5O43304 696 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 HNRNPCL1O60812 293 aaKnown RBP6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 PPFIA2O75334 1257 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 NDUFB8O95169 186 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 IFNA2P01563 188 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 TFPIP10646 304 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 RARGP13631 454 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 CHRNB2P17787 502 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 ITGAXP20702 1163 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 TM4SF1P30408 202 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 CDAP32320 146 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 DCTDP32321 178 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 HOXD13P35453 343 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 MMP13P45452 471 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 PIP4K2AP48426 406 aaPredicted RBP6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 COL28A1Q2UY09 1125 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 ESCO2Q56NI9 601 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 PRAMEF19Q5SWL8 479 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 PIP4P1Q86T03 277 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 NOXA1Q86UR1 476 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 CCDC105Q8IYK2 499 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 WDTC1Q8N5D0 677 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 NANOGP1Q8N7R0 232 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 NEK9Q8TD19 979 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 TMEM18Q96B42 140 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 POLDIP3Q9BY77 421 aaKnown RBP6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 NPFFR1Q9GZQ6 430 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 SYNCQ9H7C4 482 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 KIF9Q9HAQ2 790 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 ASAH2Q9NR71 780 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 DECR2Q9NUI1 292 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 TUBA8Q9NY65 449 aaPredicted RBP6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 PLK2Q9NYY3 685 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 SLC45A1Q9Y2W3 748 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 LSM4Q9Y4Z0 139 aaKnown RBP6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 A3GALT2U3KPV4 340 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 RALGAPBQ86X10 1494 aa6.6□□□□□ -1.35
LPCAT3-213ENST00000620843 COL14A1Q05707 1796 aaKnown RBP6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 RREB1Q92766 1687 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 ZNF804BA4D1E1 1349 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 A0A0U1RQF3 1178 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 PTGES3LE9PB15 166 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 ZC3H11AO75152 810 aaKnown RBP eCLIP6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 KLKB1P03952 638 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 KRT10P13645 584 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 ALOX12P18054 663 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 HADHAP40939 763 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 SSBP2P81877 361 aaPredicted RBP6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 FAM27E3Q08E93 113 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 CSTF3Q12996 717 aaKnown RBP6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 LPIN1Q14693 890 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 LCTLQ6UWM7 567 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 SLC16A12Q6ZSM3 486 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 GSTA5Q7RTV2 222 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 RBFAQ8N0V3 343 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 ZCCHC9Q8N567 271 aaKnown RBP6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 ENGASEQ8NFI3 743 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 BICD2Q8TD16 824 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 SCFD2Q8WU76 684 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 MMABQ96EY8 250 aaPredicted RBP6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 TKTL2Q9H0I9 626 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 BPIFA1Q9NP55 256 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 ANKRD10Q9NXR5 420 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 NSMCE4AQ9NXX6 385 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 BTBD3Q9Y2F9 522 aa6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 AAR2Q9Y312 384 aaKnown RBP6.59□□□□□ -1.35
LPCAT3-213ENST00000620843 TNS3Q68CZ2 1445 aa6.59□□□□□ -1.36
LPCAT3-213ENST00000620843 LRPPRCP42704 1394 aaKnown RBP6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 SRCAPQ6ZRS2 3230 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 RPGRIP1LQ68CZ1 1315 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 NPHP3Q7Z494 1330 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 ADGRB1O14514 1584 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 WNK3Q9BYP7 1800 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 GAGE12JA6NER3 117 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 KLK8O60259 260 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 EPN2O95208 641 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 FGBP02675 491 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 HOXB5P09067 269 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 PRF1P14222 555 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 ALDH7A1P49419 539 aaKnown RBP6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 SRSF1Q07955 248 aaKnown RBP eCLIP6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 ARHGEF6Q15052 776 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 TCTN1Q2MV58 587 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 Q5PR19 223 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 KLHL35Q6PF15 583 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 TRAPPC11Q7Z392 1133 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 ARHGAP12Q8IWW6 846 aa6.58□□□□□ -1.36
LPCAT3-213ENST00000620843 PARP16Q8N5Y8 322 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms