RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-223	ENST00000620632	GAREM1	Q9H706	876 aa		10.81	□□□□□ -0.68
TARDBP-223	ENST00000620632	TMEM9B	Q9NQ34	198 aa		10.81	□□□□□ -0.68
TARDBP-223	ENST00000620632	KCND1	Q9NSA2	647 aa		10.81	□□□□□ -0.68
TARDBP-223	ENST00000620632	DNAAF2	Q9NVR5	837 aa	Known RBP	10.81	□□□□□ -0.68
TARDBP-223	ENST00000620632	SNX12	Q9UMY4	172 aa		10.81	□□□□□ -0.68
TARDBP-223	ENST00000620632	RPL26L1	Q9UNX3	145 aa	Known RBP	10.81	□□□□□ -0.68
TARDBP-223	ENST00000620632	SPO11	Q9Y5K1	396 aa		10.81	□□□□□ -0.68
TARDBP-223	ENST00000620632	HS3ST3A1	Q9Y663	406 aa		10.81	□□□□□ -0.68
TARDBP-223	ENST00000620632	ZFC3H1	O60293	1989 aa	Known RBP	10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632		A6NNZ2	444 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	FPGT	O14772	594 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	TM4SF5	O14894	197 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	AURKA	O14965	403 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	OPHN1	O60890	802 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	GCAT	O75600	419 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	NDST3	O95803	873 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	PCCB	P05166	539 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	ZSCAN5DP	P0CG00	497 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	CA4	P22748	312 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	ADRA1A	P35348	466 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	KCNJ1	P48048	391 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	STC1	P52823	247 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	C21orf59	P57076	290 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	GNG11	P61952	73 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	MPP3	Q13368	585 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	LRRC14	Q15048	493 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	ACOX1	Q15067	660 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	CCNG2	Q16589	344 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	SIRPB2	Q5JXA9	342 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	KCTD16	Q68DU8	428 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	KCTD11	Q693B1	232 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632		Q6ZVL8	140 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	LYSMD3	Q7Z3D4	306 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	TAB3	Q8N5C8	712 aa	Predicted RBP	10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	SLC25A41	Q8N5S1	370 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	DTD2	Q96FN9	168 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	FICD	Q9BVA6	458 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	ZDHHC5	Q9C0B5	715 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	CD84	Q9UIB8	345 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	SPTBN4	Q9H254	2564 aa		10.8	□□□□□ -0.68
TARDBP-223	ENST00000620632	C1orf232	A0A0U1RR37	186 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632		A0A1B0GTQ1	180 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	PSMD11	O00231	422 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	SLC30A4	O14863	429 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	USP12	O75317	370 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	CER1	O95813	267 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	SOD1	P00441	154 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	AGT	P01019	485 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	ITGAV	P06756	1048 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	CD59	P13987	128 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	ATXN3	P54252	364 aa	Predicted RBP	10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	ARHGAP8	P85298	464 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	OVGP1	Q12889	678 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	MSLN	Q13421	630 aa	Predicted RBP	10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	ARHGEF7	Q14155	803 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	FZD2	Q14332	565 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	SPARCL1	Q14515	664 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	INPP5A	Q14642	412 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	SLC1A5	Q15758	541 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	UAP1L1	Q3KQV9	507 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	ZNF542P	Q5EBM4	170 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	ITPRIPL1	Q6GPH6	555 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	TTC27	Q6P3X3	843 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	DRICH1	Q6PGQ1	229 aa	Predicted RBP	10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	NUS1	Q96E22	293 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	IFT43	Q96FT9	208 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	PBK	Q96KB5	322 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	AGAP2	Q99490	1192 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	ELF4	Q99607	663 aa	Predicted RBP	10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	APOL2	Q9BQE5	337 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	AP1M1	Q9BXS5	423 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	ADGRE3	Q9BY15	652 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	ABCG8	Q9H221	673 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	GDF3	Q9NR23	364 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	TM7SF3	Q9NS93	570 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	DLL3	Q9NYJ7	618 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	KLF15	Q9UIH9	416 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	CDV3	Q9UKY7	258 aa	Known RBP	10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	SHOC2	Q9UQ13	582 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	ZNF148	Q9UQR1	794 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	ZNF711	Q9Y462	761 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	OR1A2	Q9Y585	309 aa		10.79	□□□□□ -0.68
TARDBP-223	ENST00000620632	SPTY2D1-AS1	A0A0U1RR47	76 aa		10.78	□□□□□ -0.68
TARDBP-223	ENST00000620632	ANXA9	O76027	345 aa		10.78	□□□□□ -0.68
TARDBP-223	ENST00000620632	STK10	O94804	968 aa	Known RBP	10.78	□□□□□ -0.68
TARDBP-223	ENST00000620632	IFNB1	P01574	187 aa		10.78	□□□□□ -0.68
TARDBP-223	ENST00000620632	EPO	P01588	193 aa		10.78	□□□□□ -0.68
TARDBP-223	ENST00000620632	SLC4A1	P02730	911 aa		10.78	□□□□□ -0.68
TARDBP-223	ENST00000620632	ZNF30	P17039	623 aa		10.78	□□□□□ -0.68
TARDBP-223	ENST00000620632	RABIF	P47224	123 aa		10.78	□□□□□ -0.68
TARDBP-223	ENST00000620632	GEM	P55040	296 aa		10.78	□□□□□ -0.68
TARDBP-223	ENST00000620632	BNIP3	Q12983	259 aa		10.78	□□□□□ -0.68
TARDBP-223	ENST00000620632	EIF2B5	Q13144	721 aa	Known RBP	10.78	□□□□□ -0.68
TARDBP-223	ENST00000620632	PDE1C	Q14123	709 aa	Predicted RBP	10.78	□□□□□ -0.68
TARDBP-223	ENST00000620632	PARP6	Q2NL67	630 aa		10.78	□□□□□ -0.68
TARDBP-223	ENST00000620632	P3H1	Q32P28	736 aa		10.78	□□□□□ -0.68
TARDBP-223	ENST00000620632	PAPD7	Q5XG87	772 aa	Known RBP	10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms