RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 PNCKQ6P2M8 343 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 DENND1BQ6P3S1 775 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 MTFR2Q6P444 385 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 MED25Q71SY5 747 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 RD3Q7Z3Z2 195 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 DEFB106AQ8N104 65 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 SFRP1Q8N474 314 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 RBMXL3Q8N7X1 1067 aaKnown RBP4.58□□□□□ -1.68
SNCA-213ENST00000618500 NTAN1Q96AB6 310 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 KLHL32Q96NJ5 620 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 PDFQ9HBH1 243 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 CASS4Q9NQ75 786 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 EPHA6Q9UF33 1036 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 G3BP2Q9UN86 482 aaKnown RBP4.58□□□□□ -1.68
SNCA-213ENST00000618500 OAS3Q9Y6K5 1087 aaKnown RBP4.58□□□□□ -1.68
SNCA-213ENST00000618500 RP1P56715 2156 aa4.58□□□□□ -1.68
SNCA-213ENST00000618500 A0A0D9SEW6 157 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 KIR2DS5A0A0G2JLQ3 304 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 A0A0G2JNG1 304 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 B4DGG1 531 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 EIF3CLB5ME19 914 aaKnown RBP4.57□□□□□ -1.68
SNCA-213ENST00000618500 GPR89AB7ZAQ6 455 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 KIR2DS3K7RE56 304 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 CLSTN1O94985 981 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 CEACAM5P06731 702 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 GPR89BP0CG08 455 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 EDN3P14138 238 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 HOXB4P17483 251 aaPredicted RBP4.57□□□□□ -1.68
SNCA-213ENST00000618500 PTPN4P29074 926 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 SSTR2P30874 369 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 OR1E1P30953 314 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 TSFMP43897 325 aaKnown RBP4.57□□□□□ -1.68
SNCA-213ENST00000618500 ITGA1P56199 1179 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 INPP5AQ14642 412 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 KIR2DS5Q14953 304 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 PARP15Q460N3 678 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 TMEM270Q6UE05 265 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 RPTNQ6XPR3 784 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 SLC47A2Q86VL8 602 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 ELOA2Q8IYF1 753 aaPredicted RBP4.57□□□□□ -1.68
SNCA-213ENST00000618500 IQCKQ8N0W5 287 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 NAGSQ8N159 534 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 FAM46DQ8NEK8 389 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 EIF3CQ99613 913 aaKnown RBP4.57□□□□□ -1.68
SNCA-213ENST00000618500 SLC25A23Q9BV35 468 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 STN1Q9H668 368 aaKnown RBP4.57□□□□□ -1.68
SNCA-213ENST00000618500 WDR26Q9H7D7 661 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 CAAP1Q9H8G2 361 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 PHPT1Q9NRX4 125 aaPredicted RBP4.57□□□□□ -1.68
SNCA-213ENST00000618500 PIGVQ9NUD9 493 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 SPATS2LQ9NUQ6 558 aaKnown RBP4.57□□□□□ -1.68
SNCA-213ENST00000618500 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.57□□□□□ -1.68
SNCA-213ENST00000618500 VPS18Q9P253 973 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 ITM2BQ9Y287 266 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 GOLGA4Q13439 2230 aaKnown RBP4.57□□□□□ -1.68
SNCA-213ENST00000618500 CROCCQ5TZA2 2017 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 TTLL8A6PVC2 850 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 SOCS5O75159 536 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 SYT1P21579 422 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 LIG3P49916 1009 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 RRADP55042 308 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 UBE2IP63279 158 aaKnown RBP4.57□□□□□ -1.68
SNCA-213ENST00000618500 NSUN2Q08J23 767 aaKnown RBP eCLIP4.57□□□□□ -1.68
SNCA-213ENST00000618500 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.57□□□□□ -1.68
SNCA-213ENST00000618500 NADK2Q4G0N4 442 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 SLC6A19Q695T7 634 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 IGFL2Q6UWQ7 119 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 BNC2Q6ZN30 1099 aaPredicted RBP4.57□□□□□ -1.68
SNCA-213ENST00000618500 PLXDC1Q8IUK5 500 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 ZNF454Q8N9F8 522 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 FAM149B1Q96BN6 582 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 HMCESQ96FZ2 354 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 COX14Q96I36 57 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 C9orf72Q96LT7 481 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 TWSG1Q9GZX9 223 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 BLZF1Q9H2G9 400 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 WDCPQ9H6R7 721 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 CHST11Q9NPF2 352 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 PCDH12Q9NPG4 1184 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 RMND1Q9NWS8 449 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 HPCAL4Q9UM19 191 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 PDZD2O15018 2839 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 FLNCQ14315 2725 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 DOPEY2Q9Y3R5 2298 aa4.57□□□□□ -1.68
SNCA-213ENST00000618500 CDC14CA4D256 554 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 TMEM202A6NGA9 273 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 I6L893 689 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 NEMP1O14524 444 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 TMCC1O94876 653 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 ADCY5O95622 1261 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 ECEL1O95672 775 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 JCHAINP01591 159 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 CD63P08962 238 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 FURINP09958 794 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 CMA1P23946 247 aa4.56□□□□□ -1.68
SNCA-213ENST00000618500 MAZP56270 477 aaKnown RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 RNASE9P60153 205 aaKnown RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 PITX1P78337 314 aaPredicted RBP4.56□□□□□ -1.68
SNCA-213ENST00000618500 LSM11P83369 360 aaKnown RBP eCLIP4.56□□□□□ -1.68
SNCA-213ENST00000618500 FKBP3Q00688 224 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms