RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 EMCNQ9ULC0 261 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 OGDHLQ9ULD0 1010 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 DNMT3AQ9Y6K1 912 aaPredicted RBP12.29□□□□□ -0.44
MATR3-227ENST00000618441 PLCH1Q4KWH8 1693 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 COL1A1P02452 1464 aaPredicted RBP12.29□□□□□ -0.44
MATR3-227ENST00000618441 TNFRSF10BO14763 440 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 GCATO75600 419 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 LDLRP01130 860 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 AGXTP21549 392 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 PRKCEQ02156 737 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 OGDHQ02218 1023 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 ALDH6A1Q02252 535 aaKnown RBP12.29□□□□□ -0.44
MATR3-227ENST00000618441 CMTR2Q8IYT2 770 aaKnown RBP12.29□□□□□ -0.44
MATR3-227ENST00000618441 CERS2Q96G23 380 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 MXRA8Q9BRK3 442 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 RSAD1Q9HA92 442 aa12.29□□□□□ -0.44
MATR3-227ENST00000618441 NUFIP1Q9UHK0 495 aaKnown RBP12.29□□□□□ -0.44
MATR3-227ENST00000618441 CNOT11Q9UKZ1 510 aaKnown RBP12.29□□□□□ -0.44
MATR3-227ENST00000618441 A0A096LPK6 155 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 RGS13O14921 159 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 SCO2O43819 266 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 TBC1D4O60343 1298 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 DNTTP04053 509 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 ALDOAP04075 364 aaKnown RBP12.28□□□□□ -0.44
MATR3-227ENST00000618441 CYP3A4P08684 503 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 UNGP13051 313 aaPredicted RBP12.28□□□□□ -0.44
MATR3-227ENST00000618441 SLC12A1Q13621 1099 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 TYSND1Q2T9J0 566 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 SAMD4BQ5PRF9 694 aaKnown RBP12.28□□□□□ -0.44
MATR3-227ENST00000618441 DPY19L3Q6ZPD9 716 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 RPS27LQ71UM5 84 aaKnown RBP12.28□□□□□ -0.44
MATR3-227ENST00000618441 MILR1Q7Z6M3 343 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 SLC51BQ86UW2 128 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 C8orf59Q8N0T1 100 aaPredicted RBP12.28□□□□□ -0.44
MATR3-227ENST00000618441 EXT2Q93063 718 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 COPS4Q9BT78 406 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 DSN1Q9H410 356 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 DHX33Q9H6R0 707 aaKnown RBP12.28□□□□□ -0.44
MATR3-227ENST00000618441 VRTNQ9H8Y1 702 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 CPNE5Q9HCH3 593 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 RANGRFQ9HD47 186 aaPredicted RBP12.28□□□□□ -0.44
MATR3-227ENST00000618441 ZDHHC2Q9UIJ5 367 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 ACAD8Q9UKU7 415 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 HCN4Q9Y3Q4 1203 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 PCDHGA10Q9Y5H3 936 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 RBP1P09455 135 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 SHMT2P34897 504 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 CLCNKBP51801 687 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 PRAMEF18Q5VWM3 479 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 TAF2Q6P1X5 1199 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 ASB12Q8WXK4 309 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 ALOXE3Q9BYJ1 711 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.28□□□□□ -0.44
MATR3-227ENST00000618441 RBAKQ9NYW8 714 aaPredicted RBP12.28□□□□□ -0.44
MATR3-227ENST00000618441 ZBTB5O15062 677 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 ITGALP20701 1170 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 OXTRP30559 389 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 BAG6P46379 1132 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 ARHGDIAP52565 204 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 BCAR1P56945 870 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 DSTNP60981 165 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 ACTR2P61160 394 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 HYIQ5T013 277 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 REP15Q6BDI9 236 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 LYSMD2Q8IV50 215 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 CERS5Q8N5B7 392 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 DDX1Q92499 740 aaKnown RBP12.28□□□□□ -0.44
MATR3-227ENST00000618441 PHOX2BQ99453 314 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 AKIP1Q9NQ31 210 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 EHD3Q9NZN3 535 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 PRKAB1Q9Y478 270 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 DAGLAQ9Y4D2 1042 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 PCDHB12Q9Y5F1 795 aa12.28□□□□□ -0.44
MATR3-227ENST00000618441 ABCB7O75027 752 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 CSF2P04141 144 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 CYBBP04839 570 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 PPP5CP53041 499 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 GSTO1P78417 241 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 SNTA1Q13424 505 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 CCDC85BQ15834 202 aaPredicted RBP12.27□□□□□ -0.44
MATR3-227ENST00000618441 ZBTB41Q5SVQ8 909 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 AGAP6Q5VW22 663 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 C1orf186Q6ZWK4 172 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 SEPT1Q8WYJ6 367 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 ITCHQ96J02 903 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 AGAP4Q96P64 663 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 NODALQ96S42 347 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 MCMBPQ9BTE3 642 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 TRIM15Q9C019 465 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 UNC93B1Q9H1C4 597 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 POPDC2Q9HBU9 364 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 VANGL2Q9ULK5 521 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 HSPB11Q9Y547 144 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 PLK4O00444 970 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 RECQL5O94762 991 aaPredicted RBP12.27□□□□□ -0.44
MATR3-227ENST00000618441 NDUFB10O96000 172 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 CYP4B1P13584 511 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 SLC36A3Q495N2 470 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 SEZ6Q53EL9 994 aa12.27□□□□□ -0.44
MATR3-227ENST00000618441 CLVS2Q5SYC1 327 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms