RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ZNF425Q6IV72 752 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 PAQR7Q86WK9 346 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 RUSC1Q9BVN2 902 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 TRPV4Q9HBA0 871 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 SLC18A2Q05940 514 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 TIGD6Q17RP2 521 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 PGAM4Q8N0Y7 254 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 MFSD8Q8NHS3 518 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 MTMR8Q96EF0 704 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 APBA2Q99767 749 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 TMEM9Q9P0T7 183 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 BNIP3Q12983 259 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 STARD3Q14849 445 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 FSCN1Q16658 493 aaKnown RBP15.04■□□□□ -0
COL5A1-208ENST00000618395 ZNF181Q2M3W8 571 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 SVOPLQ8N434 492 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 TPRG1LQ5T0D9 272 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 USPL1Q5W0Q7 1092 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 FNDC11Q9BVV2 318 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 SLA2Q9H6Q3 261 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 PRDM16Q9HAZ2 1276 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 SNTG2Q9NY99 539 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 CYP3A7-CYP3A51PA0A087WV96 503 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 SLC2A3P11169 496 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 CYP3A7P24462 503 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 THOP1P52888 689 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 PTPN20Q4JDL3 420 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 KRBOX4Q5JUW0 171 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 AUTS2Q8WXX7 1259 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 UFD1Q92890 307 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 NIF3L1Q9GZT8 377 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 PRMT8Q9NR22 394 aaPredicted RBP15.04■□□□□ -0
COL5A1-208ENST00000618395 PSME2Q9UL46 239 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 CPDO75976 1380 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 MATN1P21941 496 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 ST8SIA6P61647 398 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 NKX6-1P78426 367 aaPredicted RBP15.04■□□□□ -0
COL5A1-208ENST00000618395 GJB7Q6PEY0 223 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 TERB2Q8NHR7 220 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 ZNF420Q8TAQ5 688 aaPredicted RBP15.04■□□□□ -0
COL5A1-208ENST00000618395 TUBA1CQ9BQE3 449 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 MARK1Q9P0L2 795 aa15.04■□□□□ -0
COL5A1-208ENST00000618395 SPAG17Q6Q759 2223 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 DRG2P55039 364 aaKnown RBP15.03■□□□□ -0
COL5A1-208ENST00000618395 TAS2R41P59536 307 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 CDH17Q12864 832 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 CUL2Q13617 745 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 PFKFB4Q16877 469 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 ZNF767PQ75MW2 155 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 WDSUB1Q8N9V3 476 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 SLC5A5Q92911 643 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 RPRD1AQ96P16 312 aaPredicted RBP15.03■□□□□ -0
COL5A1-208ENST00000618395 ZNF607Q96SK3 696 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 TMEM260Q9NX78 707 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 CD36P16671 472 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 EEPD1Q7L9B9 569 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 FITM2Q8N6M3 262 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 CD101Q93033 1021 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 DYNLL2Q96FJ2 89 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 ASXL2Q76L83 1435 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 CACNA1CQ13936 2221 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 BOLA2-SMG1P6H3BVE0 249 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 POLR1CO15160 346 aaPredicted RBP15.03■□□□□ -0
COL5A1-208ENST00000618395 TULP3O75386 442 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 ITGAVP06756 1048 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 RPL3P39023 403 aaKnown RBP15.03■□□□□ -0
COL5A1-208ENST00000618395 AIMP2Q13155 320 aaKnown RBP15.03■□□□□ -0
COL5A1-208ENST00000618395 ZFP3Q96NJ6 502 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 ENTPD4Q9Y227 616 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 ARL5CA6NH57 179 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 SGCEO43556 437 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 CRTAPO75718 401 aaPredicted RBP15.03■□□□□ -0
COL5A1-208ENST00000618395 INSCQ1MX18 579 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 DCSTAMPQ9H295 470 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 KCNN3Q9UGI6 736 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 PCDHA11Q9Y5I1 949 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 EDF1O60869 148 aaKnown RBP15.03■□□□□ -0
COL5A1-208ENST00000618395 NAGLUP54802 743 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 MRPL57Q9BQC6 102 aaKnown RBP15.03■□□□□ -0
COL5A1-208ENST00000618395 ZNF700Q9H0M5 742 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 FAM86C2PA6NEL3 165 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 NPIPA7E9PJI5 369 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 PPEF1O14829 653 aaPredicted RBP15.03■□□□□ -0
COL5A1-208ENST00000618395 ACOX3O15254 700 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 NPIPA8P0DM63 369 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 TXNL4AP83876 142 aaKnown RBP15.03■□□□□ -0
COL5A1-208ENST00000618395 FBXO43Q4G163 708 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 HES5Q5TA89 166 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 TRIM40Q6P9F5 258 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 ZNF366Q8N895 744 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 RDH11Q8TC12 318 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 ADAM32Q8TC27 787 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 ZNF518BQ9C0D4 1074 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 SNTG1Q9NSN8 517 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 OPTCQ9UBM4 332 aa15.03■□□□□ -0
COL5A1-208ENST00000618395 SH3PXD2BA1X283 911 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 NUAK1O60285 661 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 MED24O75448 989 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 PET100P0DJ07 73 aa15.02■□□□□ -0
COL5A1-208ENST00000618395 INTS6LQ5JSJ4 861 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms