RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 PKD2L2Q9NZM6 624 aa13.27□□□□□ -0.29
MDC1-209ENST00000613547 ZNF711Q9Y462 761 aa13.27□□□□□ -0.29
MDC1-209ENST00000613547 ABCA7Q8IZY2 2146 aa13.27□□□□□ -0.29
MDC1-209ENST00000613547 EP300Q09472 2414 aaPredicted RBP13.27□□□□□ -0.29
MDC1-209ENST00000613547 PIEZO1Q92508 2521 aa13.27□□□□□ -0.29
MDC1-209ENST00000613547 RGSL1A5PLK6 1076 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 TLR4O00206 839 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 ARHGAP33O14559 1287 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 RAD51BO15315 384 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 CLDN7O95471 211 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 SLC4A1P02730 911 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 APRTP07741 180 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 ZSCAN5DPP0CG00 497 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 THEGLP0DJG4 465 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 ETS1P14921 441 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 ETV3P41162 512 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 STC1P52823 247 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 THOP1P52888 689 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 CLDN2P57739 230 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 IRX4P78413 519 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 BASP1P80723 227 aaKnown RBP13.26□□□□□ -0.29
MDC1-209ENST00000613547 PDE1BQ01064 536 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 CKAP4Q07065 602 aaKnown RBP13.26□□□□□ -0.29
MDC1-209ENST00000613547 MTM1Q13496 603 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 NUMA1Q14980 2115 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 PTPRRQ15256 657 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 IRF4Q15306 451 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 SF3A2Q15428 464 aaKnown RBP13.26□□□□□ -0.29
MDC1-209ENST00000613547 WSCD2Q2TBF2 565 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 KCTD11Q693B1 232 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 TCEAL6Q6IPX3 200 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 KYAT3Q6YP21 454 aaKnown RBP13.26□□□□□ -0.29
MDC1-209ENST00000613547 PPP1R21Q6ZMI0 780 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 GCNT7Q6ZNI0 430 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 PRR23CQ6ZRP0 262 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 Q6ZVL8 140 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 LYSMD3Q7Z3D4 306 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 HSD11B1LQ7Z5J1 315 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 PTAR1Q7Z6K3 402 aaPredicted RBP13.26□□□□□ -0.29
MDC1-209ENST00000613547 ABI3BPQ7Z7G0 1075 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 PRUNE1Q86TP1 453 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 CBARPQ8N350 705 aaPredicted RBP13.26□□□□□ -0.29
MDC1-209ENST00000613547 GLIS1Q8NBF1 620 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 TP53I13Q8NBR0 393 aaPredicted RBP13.26□□□□□ -0.29
MDC1-209ENST00000613547 BLOC1S5Q8TDH9 187 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 TCEAL3Q969E4 200 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 CENPTQ96BT3 561 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 DTD2Q96FN9 168 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 SMIM14Q96QK8 99 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 KLF6Q99612 283 aaPredicted RBP13.26□□□□□ -0.29
MDC1-209ENST00000613547 APOL2Q9BQE5 337 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 DDX47Q9H0S4 455 aaKnown RBP13.26□□□□□ -0.29
MDC1-209ENST00000613547 CDH19Q9H159 772 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 ETNK1Q9HBU6 452 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 ARNT2Q9HBZ2 717 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 PARD6AQ9NPB6 346 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 GDF3Q9NR23 364 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 EIF2B3Q9NR50 452 aaKnown RBP13.26□□□□□ -0.29
MDC1-209ENST00000613547 SHOC2Q9UQ13 582 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 ANKRD6Q9Y2G4 727 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 SLCO1B1Q9Y6L6 691 aa13.26□□□□□ -0.29
MDC1-209ENST00000613547 SPAG17Q6Q759 2223 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 THADAQ6YHU6 1953 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 A0A1B0GVT2 93 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 A0A1W2PR77 199 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 LNP1A1A4G5 178 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 GOLGA8CPA6NN73 597 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 C2orf81A6NN90 581 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 AP3B1O00203 1094 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 USP12O75317 370 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 URI1O94763 535 aaPredicted RBP13.25□□□□□ -0.29
MDC1-209ENST00000613547 CRTAMO95727 393 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 CER1O95813 267 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 PCCBP05166 539 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 PYGLP06737 847 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 ENGP17813 658 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 IGFALSP35858 605 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 VPS41P49754 854 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 YPEL5P62699 121 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 SARNPP82979 210 aaKnown RBP13.25□□□□□ -0.29
MDC1-209ENST00000613547 CDK16Q00536 496 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 PTSQ03393 145 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 CDH17Q12864 832 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 GRIK2Q13002 908 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 GPS1Q13098 491 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 TUBB2AQ13885 445 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 SPARCL1Q14515 664 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 TRIP13Q15645 432 aaPredicted RBP13.25□□□□□ -0.29
MDC1-209ENST00000613547 ZDHHC20Q5W0Z9 365 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 ESRP1Q6NXG1 681 aaKnown RBP13.25□□□□□ -0.29
MDC1-209ENST00000613547 Q6ZSR6 202 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 SYDE1Q6ZW31 735 aaPredicted RBP13.25□□□□□ -0.29
MDC1-209ENST00000613547 ZNF765Q7L2R6 523 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 GLT6D1Q7Z4J2 308 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 KLHL7Q8IXQ5 586 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 NRSN1Q8IZ57 195 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 DNAAF3Q8N9W5 541 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 OR13H1Q8NG92 308 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 KIF18AQ8NI77 898 aa13.25□□□□□ -0.29
MDC1-209ENST00000613547 SLCO2A1Q92959 643 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms