RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 OSCP1Q8WVF1 389 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 SNRNP27Q8WVK2 155 aaKnown RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 FIG4Q92562 907 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 PAAF1Q9BRP4 392 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 SPATA16Q9BXB7 569 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 RUBCNLQ9H714 662 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 PIDD1Q9HB75 910 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 RNASEH1O60930 286 aaKnown RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 RPP40O75818 363 aaKnown RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 GOT2P00505 430 aaKnown RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 CD68P34810 354 aaPredicted RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 MAGEA3P43357 314 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 MLLT6P55198 1093 aaPredicted RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 SCAPQ12770 1279 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 ELAVL2Q12926 359 aaKnown RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 ARHGEF7Q14155 803 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 NEDD8Q15843 81 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 TTLL9Q3SXZ7 439 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 TIGD2Q4W5G0 525 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 AFTPHQ6ULP2 937 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 MILR1Q7Z6M3 343 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 DENND1CQ8IV53 801 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 RNF168Q8IYW5 571 aaPredicted RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 B4GALNT2Q8NHY0 566 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 ZNF483Q8TF39 744 aaPredicted RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 TBC1D23Q9NUY8 699 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 IRAK4Q9NWZ3 460 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 KIF17Q9P2E2 1029 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 HS3ST4Q9Y661 456 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 CITO14578 2027 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 HMX2A2RU54 273 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 FAM149AA5PLN7 773 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 E7ENX8 843 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 G3V2L1 256 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 DEAF1O75398 565 aaPredicted RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 TMCC1O94876 653 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 FKBP9O95302 570 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 IDO1P14902 403 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 NDST2P52849 883 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 GTF2H3Q13889 308 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 HERC3Q15034 1050 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 FAM98BQ52LJ0 330 aaKnown RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 IL23RQ5VWK5 629 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 FKBP9P1Q75LS8 142 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 PKP2Q99959 881 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 SLC39A3Q9BRY0 314 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 BEGAINQ9BUH8 593 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 DPY30Q9C005 99 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 COQ10BQ9H8M1 238 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 PNPLA3Q9NST1 481 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 ANKRD31Q8N7Z5 1873 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 NT5C1B-RDH14C9J2C7 533 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 RAD51BO15315 384 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 SIX3O95343 332 aaPredicted RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 MLYCDO95822 493 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 ASGR1P07306 291 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 LPOP22079 712 aaPredicted RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 ATP6V0D1P61421 351 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 DUSP4Q13115 394 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 CMPK2Q5EBM0 449 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 CEP97Q8IW35 865 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 OR9I1Q8NGQ6 314 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 OR2T34Q8NGX1 318 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 OR2T3Q8NH03 318 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 HOPXQ9BPY8 73 aaPredicted RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 ACTR8Q9H981 624 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 WDR6Q9NNW5 1121 aaKnown RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 NMRK2Q9NPI5 230 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 STARD7Q9NQZ5 370 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 LIMD1Q9UGP4 676 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 LEF1Q9UJU2 399 aaPredicted RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 TBKBP1A7MCY6 615 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 A8MX80 341 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 PIP5K1BO14986 540 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 HNRNPRO43390 633 aaKnown RBP8.68□□□□□ -1.02
LIG4-204ENST00000611712 DNAJA2O60884 412 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 NDST3O95803 873 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 ZNF7P17097 686 aaPredicted RBP8.68□□□□□ -1.02
LIG4-204ENST00000611712 GJA5P36382 358 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 PBX3P40426 434 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 TTPAP49638 278 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 YBEYP58557 167 aaPredicted RBP8.68□□□□□ -1.02
LIG4-204ENST00000611712 BNIP2Q12982 314 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 PRKG2Q13237 762 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 PARP15Q460N3 678 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 GPRIN3Q6ZVF9 776 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 ADGRG6Q86SQ4 1221 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 PIM3Q86V86 326 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 CENPLQ8N0S6 344 aaPredicted RBP8.68□□□□□ -1.02
LIG4-204ENST00000611712 LINGO1Q96FE5 620 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 TMEM209Q96SK2 561 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 GPR21Q99679 349 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 GORASP1Q9BQQ3 440 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 SYT17Q9BSW7 474 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 COMMD8Q9NX08 183 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 MIOSQ9NXC5 875 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 DNMT3LQ9UJW3 386 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 LRRC37AA6NMS7 1700 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 EVPLQ92817 2033 aa8.68□□□□□ -1.02
LIG4-204ENST00000611712 BBIP1A8MTZ0 92 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms