RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 OGNP20774 298 aaKnown RBP13.63□□□□□ -0.23
NEK3-205ENST00000610828 CA8P35219 290 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 SLC26A3P40879 764 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 ZNF140P52738 457 aaPredicted RBP13.63□□□□□ -0.23
NEK3-205ENST00000610828 TMEM198Q66K66 360 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 ISCA2Q86U28 154 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 EXT2Q93063 718 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 ZFRQ96KR1 1074 aaKnown RBP13.63□□□□□ -0.23
NEK3-205ENST00000610828 CATSPER2Q96P56 530 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 SPG21Q9NZD8 308 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 STOML1Q9UBI4 398 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 ARHGAP26Q9UNA1 814 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 INSL5Q9Y5Q6 135 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 C2orf81A6NN90 581 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 F8W8V4 182 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 SKAP2O75563 359 aaPredicted RBP13.63□□□□□ -0.23
NEK3-205ENST00000610828 MZF1P28698 734 aaPredicted RBP13.63□□□□□ -0.23
NEK3-205ENST00000610828 PRDX6P30041 224 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 KCNC1P48547 511 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 EPHB1P54762 984 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 NSUN2Q08J23 767 aaKnown RBP eCLIP13.63□□□□□ -0.23
NEK3-205ENST00000610828 PDAP1Q13442 181 aaKnown RBP13.63□□□□□ -0.23
NEK3-205ENST00000610828 TAF1AQ15573 450 aaPredicted RBP13.63□□□□□ -0.23
NEK3-205ENST00000610828 TXNDC8Q6A555 127 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 SLC22A9Q8IVM8 553 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.63□□□□□ -0.23
NEK3-205ENST00000610828 DEFB107AQ8IZN7 70 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 ARL14EPQ8N8R7 260 aaPredicted RBP13.63□□□□□ -0.23
NEK3-205ENST00000610828 SHKBP1Q8TBC3 707 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 RSRC1Q96IZ7 334 aaKnown RBP13.63□□□□□ -0.23
NEK3-205ENST00000610828 EML4Q9HC35 981 aaKnown RBP13.63□□□□□ -0.23
NEK3-205ENST00000610828 ZNF334Q9HCZ1 680 aaPredicted RBP13.63□□□□□ -0.23
NEK3-205ENST00000610828 VPS28Q9UK41 221 aa13.63□□□□□ -0.23
NEK3-205ENST00000610828 CORO1CQ9ULV4 474 aaPredicted RBP13.63□□□□□ -0.23
NEK3-205ENST00000610828 TYW5A2RUC4 315 aaKnown RBP13.62□□□□□ -0.23
NEK3-205ENST00000610828 TBX10O75333 385 aa13.62□□□□□ -0.23
NEK3-205ENST00000610828 SNUPNO95149 360 aaKnown RBP13.62□□□□□ -0.23
NEK3-205ENST00000610828 CD160O95971 181 aa13.62□□□□□ -0.23
NEK3-205ENST00000610828 CD1EP15812 388 aa13.62□□□□□ -0.23
NEK3-205ENST00000610828 ITGAXP20702 1163 aa13.62□□□□□ -0.23
NEK3-205ENST00000610828 CES1P23141 567 aa13.62□□□□□ -0.23
NEK3-205ENST00000610828 PIK3R1P27986 724 aa13.62□□□□□ -0.23
NEK3-205ENST00000610828 PPARGP37231 505 aaPredicted RBP13.62□□□□□ -0.23
NEK3-205ENST00000610828 ACTR3P61158 418 aa13.62□□□□□ -0.23
NEK3-205ENST00000610828 TIAL1Q01085 375 aaKnown RBP eCLIP13.62□□□□□ -0.23
NEK3-205ENST00000610828 TCEAL8Q8IYN2 117 aa13.62□□□□□ -0.23
NEK3-205ENST00000610828 EFHBQ8N7U6 833 aa13.62□□□□□ -0.23
NEK3-205ENST00000610828 PTERQ96BW5 349 aa13.62□□□□□ -0.23
NEK3-205ENST00000610828 MARK4Q96L34 752 aa13.62□□□□□ -0.23
NEK3-205ENST00000610828 ZBED2Q9BTP6 218 aa13.62□□□□□ -0.23
NEK3-205ENST00000610828 ADGRE3Q9BY15 652 aa13.62□□□□□ -0.23
NEK3-205ENST00000610828 MRPL17Q9NRX2 175 aaKnown RBP13.62□□□□□ -0.23
NEK3-205ENST00000610828 FNDC3AQ9Y2H6 1198 aaKnown RBP13.62□□□□□ -0.23
NEK3-205ENST00000610828 ABHD14A-ACY1A0A1B0GW23 586 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 TRPC5OSA6NMA1 111 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 ANKRD66B4E2M5 251 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 F11P03951 625 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 CD1DP15813 335 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 ZNF37AP17032 561 aaPredicted RBP13.61□□□□□ -0.23
NEK3-205ENST00000610828 HOXB8P17481 243 aaPredicted RBP13.61□□□□□ -0.23
NEK3-205ENST00000610828 LAG3P18627 525 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 HDCP19113 662 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 SP100P23497 879 aaPredicted RBP13.61□□□□□ -0.23
NEK3-205ENST00000610828 ABL2P42684 1182 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 ZXDBP98169 803 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 SULT2A1Q06520 285 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 ILF2Q12905 390 aaKnown RBP13.61□□□□□ -0.23
NEK3-205ENST00000610828 CDH18Q13634 790 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 TAF11Q15544 211 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 TYSND1Q2T9J0 566 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 PPM1LQ5SGD2 360 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 AFTPHQ6ULP2 937 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 DDX53Q86TM3 631 aaKnown RBP13.61□□□□□ -0.23
NEK3-205ENST00000610828 CUZD1Q86UP6 607 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 TMA16Q96EY4 203 aaKnown RBP13.61□□□□□ -0.23
NEK3-205ENST00000610828 ZNF570Q96NI8 536 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 AARSD1Q9BTE6 412 aaKnown RBP13.61□□□□□ -0.23
NEK3-205ENST00000610828 CCDC28BQ9BUN5 200 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 RC3H2Q9HBD1 1191 aaKnown RBP13.61□□□□□ -0.23
NEK3-205ENST00000610828 INTS10Q9NVR2 710 aaKnown RBP13.61□□□□□ -0.23
NEK3-205ENST00000610828 STX18Q9P2W9 335 aaKnown RBP13.61□□□□□ -0.23
NEK3-205ENST00000610828 STOML2Q9UJZ1 356 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 CPQQ9Y646 472 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 ANKRD36A6QL64 1941 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 TEX28O15482 410 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 PDE5AO76074 875 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 SUPT7LO94864 414 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 CLTBP09497 229 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 THRAP10827 490 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 FMO4P31512 558 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 SLC34A1Q06495 639 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 TRAF2Q12933 501 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 PTPRRQ15256 657 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 TLDC1Q6P9B6 456 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 SNX32Q86XE0 403 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 GIMAP7Q8NHV1 300 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 ACTRT2Q8TDY3 377 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 CCDC124Q96CT7 223 aaKnown RBP13.61□□□□□ -0.23
NEK3-205ENST00000610828 FEM1AQ9BSK4 669 aa13.61□□□□□ -0.23
NEK3-205ENST00000610828 RTKNQ9BST9 563 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms