RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 MCEEQ96PE7 176 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 SELENOOQ9BVL4 669 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 THAP2Q9H0W7 228 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 FAM204AQ9H8W3 233 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 GRPEL1Q9HAV7 217 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 DDIT4Q9NX09 232 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 CNOT8Q9UFF9 292 aaKnown RBP12.35□□□□□ -0.43
HLA-F-230ENST00000606273 TLR6Q9Y2C9 796 aa12.35□□□□□ -0.43
HLA-F-230ENST00000606273 COL27A1Q8IZC6 1860 aaPredicted RBP12.34□□□□□ -0.43
HLA-F-230ENST00000606273 TLN1Q9Y490 2541 aaKnown RBP12.34□□□□□ -0.43
HLA-F-230ENST00000606273 A0A1W2PQU0 124 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 TPP1O14773 563 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 MUSKO15146 869 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 MOCS2O96007 188 aaPredicted RBP12.34□□□□□ -0.43
HLA-F-230ENST00000606273 CSF2P04141 144 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 HGFP14210 728 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 VAV1P15498 845 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 EIF1AXP47813 144 aaKnown RBP12.34□□□□□ -0.43
HLA-F-230ENST00000606273 CD97P48960 835 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 POLE2P56282 527 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 CLDN2P57739 230 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 TAS2R38P59533 333 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 SPIDRQ14159 915 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 NR0B2Q15466 257 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 SLC18A3Q16572 532 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 SLC25A52Q3SY17 297 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 DNAJC24Q6P3W2 148 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 Q6ZSR6 202 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 ARCQ7LC44 396 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 ABI3BPQ7Z7G0 1075 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 B3GNT8Q7Z7M8 397 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 DSG4Q86SJ6 1040 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 DTX1Q86Y01 620 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 TMEM139Q8IV31 216 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 TRIM62Q9BVG3 475 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 MAGEB5Q9BZ81 275 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 FZD3Q9NPG1 666 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 ZNHIT6Q9NWK9 470 aaKnown RBP12.34□□□□□ -0.43
HLA-F-230ENST00000606273 MYO1AQ9UBC5 1043 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 TUBD1Q9UJT1 453 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 PPM1HQ9ULR3 514 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 SNX10Q9Y5X0 201 aa12.34□□□□□ -0.43
HLA-F-230ENST00000606273 GOLGA6L3A6NEY3 463 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 SOWAHDA6NJG2 315 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 KCNU1A8MYU2 1149 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 PDE2AO00408 941 aaPredicted RBP12.33□□□□□ -0.44
HLA-F-230ENST00000606273 NTN3O00634 580 aaPredicted RBP12.33□□□□□ -0.44
HLA-F-230ENST00000606273 CCP110O43303 1012 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 ACSL4O60488 711 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 ENDOD1O94919 500 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 NME1P15531 152 aaKnown RBP12.33□□□□□ -0.44
HLA-F-230ENST00000606273 PDGFRAP16234 1089 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 GPD1P21695 349 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 CXCR3P49682 368 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 HDAC4P56524 1084 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 RPS24P62847 133 aaKnown RBP12.33□□□□□ -0.44
HLA-F-230ENST00000606273 DEUP1Q05D60 604 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 FZD2Q14332 565 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 CDO1Q16878 200 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 ZNF284Q2VY69 593 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 DEFB133Q30KQ1 61 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 FAM46CQ5VWP2 391 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 NEK5Q6P3R8 708 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 GCNT7Q6ZNI0 430 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 ZFAND4Q86XD8 727 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 DCP2Q8IU60 420 aaKnown RBP12.33□□□□□ -0.44
HLA-F-230ENST00000606273 APCDD1Q8J025 514 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 CARNMT1Q8N4J0 409 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 ARFGAP1Q8N6T3 406 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 CENPIQ92674 756 aaPredicted RBP12.33□□□□□ -0.44
HLA-F-230ENST00000606273 MIB2Q96AX9 1013 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 PGAP3Q96FM1 320 aaPredicted RBP12.33□□□□□ -0.44
HLA-F-230ENST00000606273 BMFQ96LC9 184 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 PRICKLE1Q96MT3 831 aaPredicted RBP12.33□□□□□ -0.44
HLA-F-230ENST00000606273 PANX2Q96RD6 677 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 CCDC3Q9BQI4 270 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 BOCQ9BWV1 1114 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 SLC12A9Q9BXP2 914 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 C7orf69Q9H7B7 122 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 PREBQ9HCU5 417 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 GPR27Q9NS67 375 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 TFR2Q9UP52 801 aa12.33□□□□□ -0.44
HLA-F-230ENST00000606273 TMEM191CA6NGB0 347 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 TMX2-CTNND1H3BSU7 103 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 AQP9O43315 295 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 AKR1B10O60218 316 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 MOCS3O95396 460 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 TGFB1P01137 390 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 CYP1A2P05177 515 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 HNRNPA2B1P22626 353 aaKnown RBP12.32□□□□□ -0.44
HLA-F-230ENST00000606273 AKT2P31751 481 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 PTPN9P43378 593 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 SLC11A2P49281 568 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 STK19P49842 368 aaPredicted RBP12.32□□□□□ -0.44
HLA-F-230ENST00000606273 IRAK1P51617 712 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 MS4A13Q5J8X5 152 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 RNF219Q5W0B1 726 aaPredicted RBP12.32□□□□□ -0.44
HLA-F-230ENST00000606273 RAP1GAP2Q684P5 730 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 RAD9BQ6WBX8 426 aa12.32□□□□□ -0.44
HLA-F-230ENST00000606273 VPS36Q86VN1 386 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms