RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 C12orf43Q96C57 262 aaKnown RBP4.75□□□□□ -1.65
LINC01109-201ENST00000603837 WRNIP1Q96S55 665 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 C17orf62Q9BQA9 187 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 KIFC3Q9BVG8 833 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 CINPQ9BW66 212 aaPredicted RBP4.75□□□□□ -1.65
LINC01109-201ENST00000603837 C1QTNF7Q9BXJ2 289 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 C1orf21Q9H246 121 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 DPEP3Q9H4B8 488 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 TRIM39Q9HCM9 518 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 ZC4H2Q9NQZ6 224 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.75□□□□□ -1.65
LINC01109-201ENST00000603837 SLC39A1Q9NY26 324 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 TAS2R7Q9NYW3 318 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 TAS2R3Q9NYW6 316 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 TAS2R1Q9NYW7 299 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 COX16Q9P0S2 106 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 PACSIN2Q9UNF0 486 aaPredicted RBP4.75□□□□□ -1.65
LINC01109-201ENST00000603837 MAPRE3Q9UPY8 281 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 ANKRD6Q9Y2G4 727 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 FNDC3AQ9Y2H6 1198 aaKnown RBP4.75□□□□□ -1.65
LINC01109-201ENST00000603837 MAU2Q9Y6X3 613 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 PKD1L3Q7Z443 1732 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 ZNF831Q5JPB2 1677 aa4.75□□□□□ -1.65
LINC01109-201ENST00000603837 ABCB11O95342 1321 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 A0A0D9SFI3 127 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 AQP12BA6NM10 295 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 ZNF839A8K0R7 811 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 EVPLLA8MZ36 301 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 NT5C1B-RDH14C9J2C7 533 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 PGRMC1O00264 195 aaKnown RBP4.74□□□□□ -1.65
LINC01109-201ENST00000603837 UBE2CO00762 179 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 ACOX3O15254 700 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 ASNA1O43681 348 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 PI15O43692 258 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 TNFRSF6BO95407 300 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 GH2P01242 217 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 OPN1MWP04001 364 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 TPOP07202 933 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 ANXA6P08133 673 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 HOXB7P09629 217 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 OPN1MW2P0DN77 364 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 OPN1MW3P0DN78 364 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 CLUP10909 449 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 CDH1P12830 882 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 ITGB8P26012 769 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 RRM2P31350 389 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 OR3A3P47888 321 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 GDI2P50395 445 aaKnown RBP4.74□□□□□ -1.65
LINC01109-201ENST00000603837 GBX2P52951 348 aaPredicted RBP4.74□□□□□ -1.65
LINC01109-201ENST00000603837 CABP4P57796 275 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 S100A12P80511 92 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 SCRN3Q0VDG4 424 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 ZMYND11Q15326 602 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 TRIP4Q15650 581 aaPredicted RBP4.74□□□□□ -1.65
LINC01109-201ENST00000603837 NFIL3Q16649 462 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 SEZ6Q53EL9 994 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 Q5PR19 223 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 RNF219Q5W0B1 726 aaPredicted RBP4.74□□□□□ -1.65
LINC01109-201ENST00000603837 GTF2IRD2BQ6EKJ0 949 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 RINT1Q6NUQ1 792 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 SLCO4C1Q6ZQN7 724 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 CUZD1Q86UP6 607 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 GTF2IRD2Q86UP8 949 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 FAM124AQ86V42 546 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 TUSC5Q8IXB3 177 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 BEND7Q8N7W2 519 aaPredicted RBP4.74□□□□□ -1.65
LINC01109-201ENST00000603837 FANCBQ8NB91 859 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 GMCL1P1Q8NEA9 526 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 TTC16Q8NEE8 873 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 OR6S1Q8NH40 331 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 SPATA20Q8TB22 786 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 SEC14L1Q92503 715 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 EDEM1Q92611 657 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 ISOC1Q96CN7 298 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 MTBPQ96DY7 904 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 AHCYL2Q96HN2 611 aaKnown RBP4.74□□□□□ -1.65
LINC01109-201ENST00000603837 ZFYVE19Q96K21 471 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 CRAMP1Q96RY5 1269 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 TXN2Q99757 166 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 TRIM51Q9BSJ1 452 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 MCMBPQ9BTE3 642 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 MLPHQ9BV36 600 aaPredicted RBP4.74□□□□□ -1.65
LINC01109-201ENST00000603837 TRIM2Q9C040 744 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 MS4A5Q9H3V2 200 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 HIPK3Q9H422 1215 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 ST6GALNAC4Q9H4F1 302 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 IGFLR1Q9H665 355 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 EBF1Q9UH73 591 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 CORINQ9Y5Q5 1042 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 STON1Q9Y6Q2 735 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 SPEF2Q9C093 1822 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 PAPPAQ13219 1627 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 C1orf232A0A0U1RR37 186 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 C12orf71A8MTZ7 269 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 CES2O00748 559 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 GIPC1O14908 333 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 OIP5O43482 229 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 TSPAN3O60637 253 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 PTP4A3O75365 173 aa4.74□□□□□ -1.65
LINC01109-201ENST00000603837 SEC22BO75396 215 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms