RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 CFAP58Q5T655 872 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 KDELC1Q6UW63 502 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 ZDHHC24Q6UX98 284 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 ZCCHC9Q8N567 271 aaKnown RBP15.05■□□□□ -0
TRIM28-207ENST00000597136 PAF1Q8N7H5 531 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 PIH1D2Q8WWB5 315 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 RAB7BQ96AH8 199 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 PARD6BQ9BYG5 372 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 ZDHHC18Q9NUE0 388 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 GOLGA6AQ9NYA3 693 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 SHOC2Q9UQ13 582 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 CA5BQ9Y2D0 317 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 LRP4O75096 1905 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 PLXNB3Q9ULL4 1909 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 A0A1W2PPC4 97 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 SMAPO00193 183 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 NEMP1O14524 444 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 TMEM63AO94886 807 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 SUN1O94901 812 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 PAK4O96013 591 aaPredicted RBP15.04■□□□□ -0
TRIM28-207ENST00000597136 CTPS1P17812 591 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 XPAP23025 273 aaPredicted RBP15.04■□□□□ -0
TRIM28-207ENST00000597136 TNFRSF8P28908 595 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 ECHS1P30084 290 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 ADRA1AP35348 466 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 VSNL1P62760 191 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 FAM193AP78312 1265 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 SPARCL1Q14515 664 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 TMEM259Q4ZIN3 620 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 WDR45BQ5MNZ6 344 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 ARMC12Q5T9G4 340 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 WDR93Q6P2C0 686 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 TRIM69Q86WT6 500 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 HORMAD1Q86X24 394 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 FBXO25Q8TCJ0 367 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 FEM1CQ96JP0 617 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 MRGPRX2Q96LB1 330 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 MYOCQ99972 504 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 TDRD1Q9BXT4 1180 aaKnown RBP15.04■□□□□ -0
TRIM28-207ENST00000597136 FAM129AQ9BZQ8 928 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 LRRC40Q9H9A6 602 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 FZD3Q9NPG1 666 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 COQ6Q9Y2Z9 468 aa15.04■□□□□ -0
TRIM28-207ENST00000597136 GOLGA8CPA6NN73 597 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 TSPAN6O43657 245 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 CPP00450 1065 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 ALPIP09923 528 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 CD27P26842 260 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 POLR2LP62875 67 aaKnown RBP15.03■□□□□ -0
TRIM28-207ENST00000597136 IRX4P78413 519 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 OLIG2Q13516 323 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 HLTFQ14527 1009 aaKnown RBP eCLIP15.03■□□□□ -0
TRIM28-207ENST00000597136 PCSK7Q16549 785 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 PEAR1Q5VY43 1037 aaPredicted RBP15.03■□□□□ -0
TRIM28-207ENST00000597136 NEK5Q6P3R8 708 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 LAYNQ6UX15 382 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 KDM7AQ6ZMT4 941 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 EIF1ADQ8N9N8 165 aaKnown RBP15.03■□□□□ -0
TRIM28-207ENST00000597136 MCUQ8NE86 351 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 IPMKQ8NFU5 416 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 SLC17A9Q9BYT1 436 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 RXFP3Q9NSD7 469 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 SEMA4GQ9NTN9 838 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 NFU1Q9UMS0 254 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 PCDHGA5Q9Y5G8 931 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 PIKFYVEQ9Y2I7 2098 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 BPTFQ12830 3046 aa15.03■□□□□ -0
TRIM28-207ENST00000597136 GOLGA8MH3BSY2 632 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 RAD51BO15315 384 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 USP12O75317 370 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 AGTP01019 485 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 WNT1P04628 370 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 TUBBP07437 444 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 MCM3P25205 808 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 MMP12P39900 470 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 GRIA1P42261 906 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 CSNK1EP49674 416 aaKnown RBP15.02■□□□□ -0
TRIM28-207ENST00000597136 RPS21P63220 83 aaKnown RBP15.02■□□□□ -0
TRIM28-207ENST00000597136 RALGDSQ12967 914 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 TMEM52BQ4KMG9 183 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 RANBP10Q6VN20 620 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 CCNI2Q6ZMN8 369 aaPredicted RBP15.02■□□□□ -0
TRIM28-207ENST00000597136 SPOCK2Q92563 424 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 SLC6A18Q96N87 628 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 TBL1YQ9BQ87 522 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 FICDQ9BVA6 458 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 C1QTNF2Q9BXJ5 285 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 FSD1LQ9BXM9 530 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 TM9SF3Q9HD45 589 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 B4GALT6Q9UBX8 382 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 RAB21Q9UL25 225 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 PHTF1Q9UMS5 762 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 PPIL1Q9Y3C6 166 aa15.02■□□□□ -0
TRIM28-207ENST00000597136 LOC285095A0A1B0GVY8 99 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 NPIPB15A6NHN6 443 aaPredicted RBP15.02□□□□□ -0.01
TRIM28-207ENST00000597136 BCAT2O15382 392 aaPredicted RBP15.02□□□□□ -0.01
TRIM28-207ENST00000597136 EPOP01588 193 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 CFIP05156 583 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 ZNF806P0C7X5 589 aa15.02□□□□□ -0.01
TRIM28-207ENST00000597136 MYBL2P10244 700 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms