RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 TRIP4Q15650 581 aaPredicted RBP15.43■□□□□ 0.06
PNKP-204ENST00000594661 MS4A13Q5J8X5 152 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 KIAA1841Q6NSI8 718 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 FBXO46Q6PJ61 603 aaPredicted RBP15.43■□□□□ 0.06
PNKP-204ENST00000594661 CYP2U1Q7Z449 544 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 C11orf74Q86VG3 221 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 ATPAF2Q8N5M1 289 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 RTL3Q8N8U3 475 aaKnown RBP15.43■□□□□ 0.06
PNKP-204ENST00000594661 USP33Q8TEY7 942 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 CDKL2Q92772 493 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 ARMC5Q96C12 935 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 ZNF419Q96HQ0 510 aaPredicted RBP15.43■□□□□ 0.06
PNKP-204ENST00000594661 LRGUKQ96M69 825 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 MLPHQ9BV36 600 aaPredicted RBP15.43■□□□□ 0.06
PNKP-204ENST00000594661 OLA1Q9NTK5 396 aaKnown RBP15.43■□□□□ 0.06
PNKP-204ENST00000594661 SLC17A6Q9P2U8 582 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 PLLPQ9Y342 182 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 RNF11Q9Y3C5 154 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 NYNRINQ9P2P1 1898 aaKnown RBP15.43■□□□□ 0.06
PNKP-204ENST00000594661 ABHD14A-ACY1A0A1B0GW23 586 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 SLC12A8A0AV02 714 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 KRBA1A5PL33 1030 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 TRIM64CA6NLI5 447 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 USP12O75317 370 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 SOD2P04179 222 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 HNRNPFP52597 415 aaKnown RBP15.43■□□□□ 0.06
PNKP-204ENST00000594661 AQP5P55064 265 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 DMPKQ09013 629 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 PDE1CQ14123 709 aaPredicted RBP15.43■□□□□ 0.06
PNKP-204ENST00000594661 ARID3BQ8IVW6 561 aaPredicted RBP15.43■□□□□ 0.06
PNKP-204ENST00000594661 WDR75Q8IWA0 830 aaKnown RBP15.43■□□□□ 0.06
PNKP-204ENST00000594661 SLC39A11Q8N1S5 342 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 GALNT4Q8N4A0 578 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 CNTD1Q8N815 330 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 HIPK4Q8NE63 616 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 OR52K1Q8NGK4 314 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 HM13Q8TCT9 377 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 TRUB1Q8WWH5 349 aaKnown RBP15.43■□□□□ 0.06
PNKP-204ENST00000594661 CCDC124Q96CT7 223 aaKnown RBP15.43■□□□□ 0.06
PNKP-204ENST00000594661 THAP11Q96EK4 314 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 TEKT5Q96M29 485 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 NAT9Q9BTE0 207 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 TTLL2Q9BWV7 592 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 COMMD8Q9NX08 183 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 TRHDEQ9UKU6 1024 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 TRIM64BA6NI03 449 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 H0YJX3 145 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 TLR5O60602 858 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 MAFKO60675 156 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 AP2A1O95782 977 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 TIMP1P01033 207 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 IGLV3-27P01718 113 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 NDST2P52849 883 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 WDR5P61964 334 aaKnown RBP15.42■□□□□ 0.06
PNKP-204ENST00000594661 NIPAL4Q0D2K0 466 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 SMAD1Q15797 465 aaKnown RBP15.42■□□□□ 0.06
PNKP-204ENST00000594661 CYP2A13Q16696 494 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 ZBED5Q49AG3 693 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 AFMIDQ63HM1 303 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 NDUFAF2Q8N183 169 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 ZNF512Q96ME7 567 aaPredicted RBP15.42■□□□□ 0.06
PNKP-204ENST00000594661 ZNF558Q96NG5 402 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 TSGA13Q96PP4 275 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 VAT1Q99536 393 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 DOK1Q99704 481 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 EPS15L1Q9UBC2 864 aa15.42■□□□□ 0.06
PNKP-204ENST00000594661 RSL1D1O76021 490 aaKnown RBP15.41■□□□□ 0.06
PNKP-204ENST00000594661 CNTN5O94779 1100 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 KLHL2O95198 593 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 ACRP10323 421 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 CCNCP24863 283 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 CNTFP26441 200 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 RCVRNP35243 200 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 CTBSQ01459 385 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 ZNF33AQ06730 810 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 ATG16L1Q676U5 607 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 KCTD11Q693B1 232 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 ZFP1Q6P2D0 407 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 CES3Q6UWW8 571 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 GPR141Q7Z602 305 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 TFAP2DQ7Z6R9 452 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 ITIH5Q86UX2 942 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 BPHLQ86WA6 291 aaPredicted RBP15.41■□□□□ 0.06
PNKP-204ENST00000594661 HPS6Q86YV9 775 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 CLVS1Q8IUQ0 354 aaPredicted RBP15.41■□□□□ 0.06
PNKP-204ENST00000594661 LRRC49Q8IUZ0 686 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 ATP6V0D2Q8N8Y2 350 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 BTN2A3PQ96KV6 586 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 ZNF641Q96N77 438 aaPredicted RBP15.41■□□□□ 0.06
PNKP-204ENST00000594661 CEP44Q9C0F1 390 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 NOL6Q9H6R4 1146 aaKnown RBP15.41■□□□□ 0.06
PNKP-204ENST00000594661 MKS1Q9NXB0 559 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 IFT52Q9Y366 437 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 N6AMT1Q9Y5N5 214 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 WASH4PA8MWX3 477 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 PROCP04070 461 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 POLBP06746 335 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 ITGAXP20702 1163 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 TCEA1P23193 301 aaKnown RBP15.41■□□□□ 0.06
PNKP-204ENST00000594661 TUFMP49411 452 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms