RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 DTX1Q86Y01 620 aa16.37■□□□□ 0.21
LIG1-205ENST00000593425 KIAA1524Q8TCG1 905 aa16.37■□□□□ 0.21
LIG1-205ENST00000593425 GPBAR1Q8TDU6 330 aa16.37■□□□□ 0.21
LIG1-205ENST00000593425 PSKH2Q96QS6 385 aa16.37■□□□□ 0.21
LIG1-205ENST00000593425 TRIM4Q9C037 500 aa16.37■□□□□ 0.21
LIG1-205ENST00000593425 PARVAQ9NVD7 372 aa16.37■□□□□ 0.21
LIG1-205ENST00000593425 CWC15Q9P013 229 aaKnown RBP16.37■□□□□ 0.21
LIG1-205ENST00000593425 PCDHGC4Q9Y5F7 938 aa16.37■□□□□ 0.21
LIG1-205ENST00000593425 ST14Q9Y5Y6 855 aa16.37■□□□□ 0.21
LIG1-205ENST00000593425 TMEM191CA6NGB0 347 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 LRRC10BA6NIK2 292 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 HTRA2O43464 458 aaPredicted RBP16.36■□□□□ 0.21
LIG1-205ENST00000593425 CPNE6O95741 557 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 ITGB2P05107 769 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 FGF1P05230 155 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 CEACAM5P06731 702 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 CCL4P13236 92 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 TNFAIP3P21580 790 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 LHCGRP22888 699 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 AK4P27144 223 aaPredicted RBP16.36■□□□□ 0.21
LIG1-205ENST00000593425 OR1D5P58170 312 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 NFKB2Q00653 900 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 DPYSQ14117 519 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 NCAPHQ15003 741 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 TSR1Q2NL82 804 aaKnown RBP16.36■□□□□ 0.21
LIG1-205ENST00000593425 AMZ1Q400G9 498 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 TMCO4Q5TGY1 634 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 DENND2CQ68D51 928 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 ZNF574Q6ZN55 896 aaPredicted RBP16.36■□□□□ 0.21
LIG1-205ENST00000593425 ZNF438Q7Z4V0 828 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 HEATR4Q86WZ0 1026 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 PGBD5Q8N414 524 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 ZDHHC1Q8WTX9 485 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 PATE1Q8WXA2 126 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 HTR3CQ8WXA8 447 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 NUDT22Q9BRQ3 303 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 ARHGAP9Q9BRR9 750 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 TEX101Q9BY14 249 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 FRMD8Q9BZ67 464 aaPredicted RBP16.36■□□□□ 0.21
LIG1-205ENST00000593425 SEPT10Q9P0V9 454 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 SEPT3Q9UH03 358 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 SDK2Q58EX2 2172 aa16.36■□□□□ 0.21
LIG1-205ENST00000593425 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.35■□□□□ 0.21
LIG1-205ENST00000593425 PDE2AO00408 941 aaPredicted RBP16.35■□□□□ 0.21
LIG1-205ENST00000593425 PRPSAP2O60256 369 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 LRCH4O75427 683 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 HEXIM1O94992 359 aaKnown RBP16.35■□□□□ 0.21
LIG1-205ENST00000593425 PEX11BO96011 259 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 CPP00450 1065 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 FAM87AP0C7U9 286 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 CCDC172P0C7W6 258 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 ITGB6P18564 788 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 CR2P20023 1033 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 CDK11BP21127 795 aaKnown RBP16.35■□□□□ 0.21
LIG1-205ENST00000593425 ALDH4A1P30038 563 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 VIPR1P32241 457 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 ETV3P41162 512 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 GNPDA1P46926 289 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 RENBPP51606 427 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 ARSDP51689 593 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 CYP4F2P78329 520 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 CDK3Q00526 305 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 KCNC4Q03721 635 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 TRAF2Q12933 501 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 NR1D2Q14995 579 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 PTPRRQ15256 657 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 HSD11B1LQ7Z5J1 315 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 RCBTB1Q8NDN9 531 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 PDCD6IPQ8WUM4 868 aaKnown RBP16.35■□□□□ 0.21
LIG1-205ENST00000593425 SPOCK2Q92563 424 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 PMEPA1Q969W9 287 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 GSDMCQ9BYG8 508 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 FAM117AQ9C073 453 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 PHPT1Q9NRX4 125 aaPredicted RBP16.35■□□□□ 0.21
LIG1-205ENST00000593425 STARD5Q9NSY2 213 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 TAAR2Q9P1P5 351 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 SUFUQ9UMX1 484 aa16.35■□□□□ 0.21
LIG1-205ENST00000593425 FLNBO75369 2602 aaKnown RBP16.35■□□□□ 0.21
LIG1-205ENST00000593425 A0A1W2PQC6 194 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 SOCS5O75159 536 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 RNF8O76064 485 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 ECEL1O95672 775 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 ATP1A3P13637 1013 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 POLD2P49005 469 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 HCAR3P49019 387 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 ILF3Q12906 894 aaKnown RBP eCLIP16.34■□□□□ 0.21
LIG1-205ENST00000593425 ZNF235Q14590 738 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 SLC30A9Q6PML9 568 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 PIM3Q86V86 326 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 NAGSQ8N159 534 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 CBARPQ8N350 705 aaPredicted RBP16.34■□□□□ 0.21
LIG1-205ENST00000593425 FNIP1Q8TF40 1166 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 JPH3Q8WXH2 748 aaPredicted RBP16.34■□□□□ 0.21
LIG1-205ENST00000593425 DTD2Q96FN9 168 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 CCDC74BQ96LY2 380 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 ZNF599Q96NL3 588 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 NUDCD1Q96RS6 583 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 NOD2Q9HC29 1040 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 ETNK2Q9NVF9 386 aa16.34■□□□□ 0.21
LIG1-205ENST00000593425 ANO10Q9NW15 660 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms