RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 C1orf61Q13536 156 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 GALNT3Q14435 633 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 NFATC4Q14934 902 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 PPP2R5EQ16537 467 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 ODF2Q5BJF6 829 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 LRRC66Q68CR7 880 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 ESRP1Q6NXG1 681 aaKnown RBP9.88□□□□□ -0.83
PTPN2-208ENST00000589216 CRTC1Q6UUV9 634 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 DHRS13Q6UX07 377 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 Q6ZVL8 140 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 USP45Q70EL2 814 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 ZC3H18Q86VM9 953 aaKnown RBP9.88□□□□□ -0.83
PTPN2-208ENST00000589216 CBARPQ8N350 705 aaPredicted RBP9.88□□□□□ -0.83
PTPN2-208ENST00000589216 SPATA22Q8NHS9 363 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 FAM174AQ8TBP5 190 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 GATA6Q92908 595 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 TSACCQ96A04 125 aaPredicted RBP9.88□□□□□ -0.83
PTPN2-208ENST00000589216 DTD2Q96FN9 168 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 IFT43Q96FT9 208 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 SCRN2Q96FV2 425 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 IMP4Q96G21 291 aaKnown RBP9.88□□□□□ -0.83
PTPN2-208ENST00000589216 RBM41Q96IZ5 413 aaKnown RBP9.88□□□□□ -0.83
PTPN2-208ENST00000589216 TRIB3Q96RU7 358 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 APOOQ9BUR5 198 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 LGR4Q9BXB1 951 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 MAK16Q9BXY0 300 aaKnown RBP9.88□□□□□ -0.83
PTPN2-208ENST00000589216 CLPBQ9H078 707 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 AMACRQ9UHK6 382 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 CD84Q9UIB8 345 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 PHTF1Q9UMS5 762 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 APOBEC2Q9Y235 224 aaKnown RBP9.88□□□□□ -0.83
PTPN2-208ENST00000589216 PPIL1Q9Y3C6 166 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 PCDHA3Q9Y5H8 950 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 ITPR1Q14643 2758 aa9.88□□□□□ -0.83
PTPN2-208ENST00000589216 ARHGEF17Q96PE2 2063 aaPredicted RBP9.87□□□□□ -0.83
PTPN2-208ENST00000589216 CFAP69A5D8W1 941 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 FAM149AA5PLN7 773 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 CASC3O15234 703 aaKnown RBP9.87□□□□□ -0.83
PTPN2-208ENST00000589216 DDX3YO15523 660 aaKnown RBP9.87□□□□□ -0.83
PTPN2-208ENST00000589216 AQP9O43315 295 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 ZRANB2O95218 330 aaKnown RBP eCLIP9.87□□□□□ -0.83
PTPN2-208ENST00000589216 PIRTP0C851 137 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 PYGMP11217 842 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 ZFXP17010 805 aaPredicted RBP9.87□□□□□ -0.83
PTPN2-208ENST00000589216 NFKB1P19838 968 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 CD68P34810 354 aaPredicted RBP9.87□□□□□ -0.83
PTPN2-208ENST00000589216 STC1P52823 247 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 NAP1L1P55209 391 aaKnown RBP9.87□□□□□ -0.83
PTPN2-208ENST00000589216 KIAA1024LP59773 190 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 HNRNPKP61978 463 aaKnown RBP eCLIP9.87□□□□□ -0.83
PTPN2-208ENST00000589216 YPEL5P62699 121 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 OTUD4Q01804 1114 aaKnown RBP9.87□□□□□ -0.83
PTPN2-208ENST00000589216 TFDP2Q14188 446 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 NOMO1Q15155 1222 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 QPCTQ16769 361 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 DEFB133Q30KQ1 61 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 PRRT3Q5FWE3 981 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 KDELC2Q7Z4H8 507 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 TECPR1Q7Z6L1 1165 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 TRIM74Q86UV6 250 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 DCP2Q8IU60 420 aaKnown RBP9.87□□□□□ -0.83
PTPN2-208ENST00000589216 SFTPA2Q8IWL1 248 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 RCOR2Q8IZ40 523 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 ACTL9Q8TC94 416 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 KIAA1524Q8TCG1 905 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 LMX1AQ8TE12 382 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 OR1E3Q8WZA6 343 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 SCAMP4Q969E2 229 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 TADA1Q96BN2 335 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 OXNAD1Q96HP4 312 aaPredicted RBP9.87□□□□□ -0.83
PTPN2-208ENST00000589216 GORASP1Q9BQQ3 440 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 PCDH9Q9HC56 1237 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 MRPL40Q9NQ50 206 aaKnown RBP9.87□□□□□ -0.83
PTPN2-208ENST00000589216 UBP1Q9NZI7 540 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 NEUROG3Q9Y4Z2 214 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 ADGRG1Q9Y653 693 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 BPTFQ12830 3046 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 ZFYVE26Q68DK2 2539 aa9.87□□□□□ -0.83
PTPN2-208ENST00000589216 DSPP15924 2871 aaKnown RBP9.86□□□□□ -0.83
PTPN2-208ENST00000589216 DMXL2Q8TDJ6 3036 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 A0A1W2PQ67 120 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 TCRBV7S2A1N4TA0A589 114 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 CCDC66A2RUB6 948 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 H3BM21 787 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 APOC4-APOC2K7ER74 178 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 PSMD11O00231 422 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 RFPL3O75679 317 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 CLDN7O95471 211 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 APOC2P02655 101 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 SLC4A1P02730 911 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 CYP2A6P11509 494 aaPredicted RBP9.86□□□□□ -0.83
PTPN2-208ENST00000589216 TSHRP16473 764 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 PTPN7P35236 360 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 TRIM23P36406 574 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 NR2C2P49116 596 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 HK3P52790 923 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 EPHB1P54762 984 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 CCZ1BP86790 482 aa9.86□□□□□ -0.83
PTPN2-208ENST00000589216 CCZ1P86791 482 aaPredicted RBP9.86□□□□□ -0.83
PTPN2-208ENST00000589216 ACACAQ13085 2346 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms