RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 ANKS6Q68DC2 871 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 ERAP2Q6P179 960 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 C16orf46Q6P387 395 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 KDELC2Q7Z4H8 507 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 ZNF438Q7Z4V0 828 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 FAM131BQ86XD5 332 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 CNGA4Q8IV77 575 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 NLGN4XQ8N0W4 816 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 EFCAB3Q8N7B9 438 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 NLGN4YQ8NFZ3 816 aaPredicted RBP8.59□□□□□ -1.03
SDF2-204ENST00000587338 ZDHHC1Q8WTX9 485 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 STARD8Q92502 1023 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 NT5C3BQ969T7 300 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 FUBP1Q96AE4 644 aaKnown RBP8.59□□□□□ -1.03
SDF2-204ENST00000587338 HMCESQ96FZ2 354 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 TTYH3Q9C0H2 523 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 PCDH12Q9NPG4 1184 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 NLRC4Q9NPP4 1024 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 PLCB1Q9NQ66 1216 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 OCIAD1Q9NX40 245 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 PPARGC1AQ9UBK2 798 aaKnown RBP8.59□□□□□ -1.03
SDF2-204ENST00000587338 DKK3Q9UBP4 350 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 PCDHGC3Q9UN70 934 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 SRPK3Q9UPE1 567 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 SIK3Q9Y2K2 1263 aa8.59□□□□□ -1.03
SDF2-204ENST00000587338 MKRN2OSH3BPM6 223 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 K7EM74 188 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 INSIG1O15503 277 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 RAMP2O60895 175 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 MFAP3LO75121 409 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 ECEL1O95672 775 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 PRKCGP05129 697 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 RNF224P0DH78 156 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 THRAP10827 490 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 TCN2P20062 427 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 PON1P27169 355 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 CSF2RBP32927 897 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 MAPKAPK2P49137 400 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 SUOXP51687 545 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 RAB15P59190 212 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 APBA1Q02410 837 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 RAPGEF1Q13905 1077 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 CFAP58Q5T655 872 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 ZNF787Q6DD87 383 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 CAPRIN2Q6IMN6 1127 aaKnown RBP8.58□□□□□ -1.04
SDF2-204ENST00000587338 ASB18Q6ZVZ8 466 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 ENOSF1Q7L5Y1 443 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 HEATR4Q86WZ0 1026 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 ZDHHC17Q8IUH5 632 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 LRRC8AQ8IWT6 810 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 OR4D9Q8NGE8 314 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 IQCDQ96DY2 449 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 EXOC2Q96KP1 924 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 CFAP57Q96MR6 1250 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 CTRCQ99895 268 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 EFHD1Q9BUP0 239 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 MAGEH1Q9H213 219 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 CARS2Q9HA77 564 aaKnown RBP8.58□□□□□ -1.04
SDF2-204ENST00000587338 PRDM8Q9NQV8 689 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 SPATS2LQ9NUQ6 558 aaKnown RBP8.58□□□□□ -1.04
SDF2-204ENST00000587338 ZNHIT6Q9NWK9 470 aaKnown RBP8.58□□□□□ -1.04
SDF2-204ENST00000587338 TMEM9Q9P0T7 183 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 PILRAQ9UKJ1 303 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 CAPN11Q9UMQ6 739 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.58□□□□□ -1.04
SDF2-204ENST00000587338 ITPR3Q14573 2671 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 ANKRD36A6QL64 1941 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 HIVEP3Q5T1R4 2406 aa8.58□□□□□ -1.04
SDF2-204ENST00000587338 SETD2Q9BYW2 2564 aaPredicted RBP8.57□□□□□ -1.04
SDF2-204ENST00000587338 PRSS38A1L453 326 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 GTPBP10A4D1E9 387 aaKnown RBP8.57□□□□□ -1.04
SDF2-204ENST00000587338 ZSCAN5CA6NGD5 496 aaPredicted RBP8.57□□□□□ -1.04
SDF2-204ENST00000587338 B4E171 279 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 GOLGA8SH3BPF8 625 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 TNFRSF10CO14798 259 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 EPHB6O15197 1021 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 KDELR3O43731 214 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 SEMA7AO75326 666 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 RECQL5O94762 991 aaPredicted RBP8.57□□□□□ -1.04
SDF2-204ENST00000587338 FGF1P05230 155 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 SKILP12757 684 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 CCNB1P14635 433 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 RHOQP17081 205 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 MSNP26038 577 aaKnown RBP8.57□□□□□ -1.04
SDF2-204ENST00000587338 MAP4P27816 1152 aaKnown RBP8.57□□□□□ -1.04
SDF2-204ENST00000587338 FLT3P36888 993 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 MMP12P39900 470 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 TSPAN7P41732 249 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 ZBED6P86452 979 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 ATP11AP98196 1134 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 MC1RQ01726 317 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 ILF3Q12906 894 aaKnown RBP eCLIP8.57□□□□□ -1.04
SDF2-204ENST00000587338 NR1D2Q14995 579 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 UGP2Q16851 508 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 FIGNQ5HY92 759 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 KLHDC7AQ5VTJ3 777 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 TRNP1Q6NT89 227 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 TCTN3Q6NUS6 607 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 TRIM65Q6PJ69 517 aa8.57□□□□□ -1.04
SDF2-204ENST00000587338 SLC30A9Q6PML9 568 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms