RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 SCFD1Q8WVM8 642 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 DPF1Q92782 380 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 SMARCE1Q969G3 411 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 CCDC127Q96BQ5 260 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 PTCD3Q96EY7 689 aaKnown RBP4.89□□□□□ -1.63
ZNF540-204ENST00000586792 HIC2Q96JB3 615 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 SPATA17Q96L03 361 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 SENP8Q96LD8 212 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 UBXN10Q96LJ8 280 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 PGLYRP2Q96PD5 576 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 SEPT5Q99719 369 aaPredicted RBP4.89□□□□□ -1.63
ZNF540-204ENST00000586792 TSG101Q99816 390 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 STRA6Q9BX79 667 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 FGFBP2Q9BYJ0 223 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 IMPG2Q9BZV3 1241 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 MTMR12Q9C0I1 747 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 EPHX3Q9H6B9 360 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 ZWILCHQ9H900 591 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 PDE11AQ9HCR9 933 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 WDR6Q9NNW5 1121 aaKnown RBP4.89□□□□□ -1.63
ZNF540-204ENST00000586792 ASAH2Q9NR71 780 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 IRAK4Q9NWZ3 460 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 DCAF16Q9NXF7 216 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 KCTD5Q9NXV2 234 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 IGSF9Q9P2J2 1179 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 NFKBIL1Q9UBC1 381 aaPredicted RBP4.89□□□□□ -1.63
ZNF540-204ENST00000586792 AFF4Q9UHB7 1163 aaKnown RBP4.89□□□□□ -1.63
ZNF540-204ENST00000586792 CDH22Q9UJ99 828 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 FBXL5Q9UKA1 691 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 AGAP1Q9UPQ3 857 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 HPSEQ9Y251 543 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 INSL5Q9Y5Q6 135 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 CHD7Q9P2D1 2997 aa4.89□□□□□ -1.63
ZNF540-204ENST00000586792 ANK1P16157 1881 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 TRANK1O15050 2925 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 VWA8A3KMH1 1905 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 TRIP11Q15643 1979 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 C2orf16Q68DN1 1984 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 FAM237AA0A1B0GTK4 181 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 PIRO00625 290 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 PDXKO00764 312 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 ZNF197O14709 1029 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 ADAM12O43184 909 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 AP1G1O43747 822 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 ULK1O75385 1050 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 ITGA10O75578 1167 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 OAZ2O95190 189 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 FGF19O95750 216 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 ADRB2P07550 413 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 POU2F2P09086 479 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 P4HA1P13674 534 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 ATP6V1B1P15313 513 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 DESP17661 470 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 PTPN2P17706 415 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 NR2F2P24468 414 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 PCSK1P29120 753 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 PPP1R2P41236 205 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 STAT1P42224 750 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 ID4P47928 161 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 LHX1P48742 406 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 TUFMP49411 452 aaKnown RBP4.88□□□□□ -1.63
ZNF540-204ENST00000586792 AARSP49588 968 aaKnown RBP eCLIP4.88□□□□□ -1.63
ZNF540-204ENST00000586792 BPIFB3P59826 476 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 IL2P60568 153 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 SSBP2P81877 361 aaPredicted RBP4.88□□□□□ -1.63
ZNF540-204ENST00000586792 MEF2AQ02078 507 aaPredicted RBP4.88□□□□□ -1.63
ZNF540-204ENST00000586792 DMTNQ08495 405 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 SIGLEC14Q08ET2 396 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 TWF1Q12792 350 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 SMARCB1Q12824 385 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 GPR17Q13304 367 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 TMED1Q13445 227 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 TDGQ13569 410 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 FHL1Q13642 323 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 E2F5Q15329 346 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 MGAT5BQ3V5L5 792 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 CCDC38Q502W7 563 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 SLC39A12Q504Y0 691 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 ARHGAP15Q53QZ3 475 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 MTX3Q5HYI7 312 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 DNTTIP2Q5QJE6 756 aaKnown RBP4.88□□□□□ -1.63
ZNF540-204ENST00000586792 PGM2L1Q6PCE3 622 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 TTC30AQ86WT1 665 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 SPATA2LQ8IUW3 424 aaPredicted RBP4.88□□□□□ -1.63
ZNF540-204ENST00000586792 EFCAB13Q8IY85 973 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 ADGRF2Q8IZF7 708 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 TMEM86AQ8N2M4 240 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 CBARPQ8N350 705 aaPredicted RBP4.88□□□□□ -1.63
ZNF540-204ENST00000586792 OR8H1Q8NGG4 311 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 SLC35G2Q8TBE7 412 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 SPATA18Q8TC71 538 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 SPPL2BQ8TCT7 592 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 C2orf15Q8WU43 125 aaKnown RBP4.88□□□□□ -1.63
ZNF540-204ENST00000586792 IPCEF1Q8WWN9 437 aaPredicted RBP4.88□□□□□ -1.63
ZNF540-204ENST00000586792 SYAP1Q96A49 352 aaPredicted RBP4.88□□□□□ -1.63
ZNF540-204ENST00000586792 AHCYL2Q96HN2 611 aaKnown RBP4.88□□□□□ -1.63
ZNF540-204ENST00000586792 HPDLQ96IR7 371 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 TIGD1Q96MW7 591 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 FAM210AQ96ND0 272 aa4.88□□□□□ -1.63
ZNF540-204ENST00000586792 MMS19Q96T76 1030 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms