RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SEMA4CQ9C0C4 833 aa15.03■□□□□ -0
VAPA-209ENST00000585042 MRPL40Q9NQ50 206 aaKnown RBP15.03■□□□□ -0
VAPA-209ENST00000585042 PHPT1Q9NRX4 125 aaPredicted RBP15.03■□□□□ -0
VAPA-209ENST00000585042 AKAP7Q9P0M2 348 aaPredicted RBP15.03■□□□□ -0
VAPA-209ENST00000585042 PHTF1Q9UMS5 762 aa15.03■□□□□ -0
VAPA-209ENST00000585042 LOXL2Q9Y4K0 774 aa15.03■□□□□ -0
VAPA-209ENST00000585042 RNF215Q9Y6U7 377 aa15.03■□□□□ -0
VAPA-209ENST00000585042 ANKRD36A6QL64 1941 aa15.03■□□□□ -0
VAPA-209ENST00000585042 TMCO5BA8MYB1 307 aa15.02■□□□□ -0
VAPA-209ENST00000585042 H3BRJ5 948 aa15.02■□□□□ -0
VAPA-209ENST00000585042 LRCH4O75427 683 aa15.02■□□□□ -0
VAPA-209ENST00000585042 CPNE6O95741 557 aa15.02■□□□□ -0
VAPA-209ENST00000585042 SFTPCP11686 197 aa15.02■□□□□ -0
VAPA-209ENST00000585042 CCNB1P14635 433 aa15.02■□□□□ -0
VAPA-209ENST00000585042 CR2P20023 1033 aa15.02■□□□□ -0
VAPA-209ENST00000585042 VIPR1P32241 457 aa15.02■□□□□ -0
VAPA-209ENST00000585042 ARL4AP40617 200 aa15.02■□□□□ -0
VAPA-209ENST00000585042 PRKCIP41743 596 aa15.02■□□□□ -0
VAPA-209ENST00000585042 GPR3P46089 330 aa15.02■□□□□ -0
VAPA-209ENST00000585042 SLC10A7Q0GE19 358 aa15.02■□□□□ -0
VAPA-209ENST00000585042 SQSTM1Q13501 440 aa15.02■□□□□ -0
VAPA-209ENST00000585042 NR1D2Q14995 579 aa15.02■□□□□ -0
VAPA-209ENST00000585042 DPYSL2Q16555 572 aa15.02■□□□□ -0
VAPA-209ENST00000585042 SKOR2Q2VWA4 1001 aaPredicted RBP15.02■□□□□ -0
VAPA-209ENST00000585042 KIAA1614Q5VZ46 1190 aa15.02■□□□□ -0
VAPA-209ENST00000585042 CAVIN1Q6NZI2 390 aaKnown RBP15.02■□□□□ -0
VAPA-209ENST00000585042 ARHGAP36Q6ZRI8 547 aa15.02■□□□□ -0
VAPA-209ENST00000585042 NYAP1Q6ZVC0 841 aa15.02■□□□□ -0
VAPA-209ENST00000585042 USP53Q70EK8 1073 aa15.02■□□□□ -0
VAPA-209ENST00000585042 ZNF438Q7Z4V0 828 aa15.02■□□□□ -0
VAPA-209ENST00000585042 LRRC49Q8IUZ0 686 aa15.02■□□□□ -0
VAPA-209ENST00000585042 SLITRK4Q8IW52 837 aa15.02■□□□□ -0
VAPA-209ENST00000585042 NPWQ8N729 165 aa15.02■□□□□ -0
VAPA-209ENST00000585042 NUS1Q96E22 293 aa15.02■□□□□ -0
VAPA-209ENST00000585042 SGF29Q96ES7 293 aa15.02■□□□□ -0
VAPA-209ENST00000585042 SCRN2Q96FV2 425 aa15.02■□□□□ -0
VAPA-209ENST00000585042 GSDMCQ9BYG8 508 aa15.02■□□□□ -0
VAPA-209ENST00000585042 B4GALT6Q9UBX8 382 aa15.02■□□□□ -0
VAPA-209ENST00000585042 CNOT8Q9UFF9 292 aaKnown RBP15.02■□□□□ -0
VAPA-209ENST00000585042 PISDQ9UG56 409 aa15.02■□□□□ -0
VAPA-209ENST00000585042 PPIL1Q9Y3C6 166 aa15.02■□□□□ -0
VAPA-209ENST00000585042 PCDHB11Q9Y5F2 797 aa15.02■□□□□ -0
VAPA-209ENST00000585042 SCN8AQ9UQD0 1980 aa15.02□□□□□ -0.01
VAPA-209ENST00000585042 B4DGG1 531 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.01□□□□□ -0.01
VAPA-209ENST00000585042 TEX33O43247 280 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 HEXIM1O94992 359 aaKnown RBP15.01□□□□□ -0.01
VAPA-209ENST00000585042 ZIC2O95409 532 aaPredicted RBP15.01□□□□□ -0.01
VAPA-209ENST00000585042 PEX11BO96011 259 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 FGF1P05230 155 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 CEACAM5P06731 702 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 CYP2A6P11509 494 aaPredicted RBP15.01□□□□□ -0.01
VAPA-209ENST00000585042 KRT10P13645 584 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 DPTQ07507 201 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 ILF3Q12906 894 aaKnown RBP eCLIP15.01□□□□□ -0.01
VAPA-209ENST00000585042 ZNF235Q14590 738 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 TCEA2Q15560 299 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 ASIC2Q16515 512 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 FILIP1LQ4L180 1135 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 TMEM164Q5U3C3 297 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 NLRP8Q86W28 1048 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 ZSCAN1Q8NBB4 408 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 NSMCE1Q8WV22 266 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 NSMCE3Q96MG7 304 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 DPYSL5Q9BPU6 564 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.01□□□□□ -0.01
VAPA-209ENST00000585042 FRMD8Q9BZ67 464 aaPredicted RBP15.01□□□□□ -0.01
VAPA-209ENST00000585042 ISCUQ9H1K1 167 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 HAUS4Q9H6D7 363 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 SPATS2LQ9NUQ6 558 aaKnown RBP15.01□□□□□ -0.01
VAPA-209ENST00000585042 TMEM63CQ9P1W3 806 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 PCDHGC4Q9Y5F7 938 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 TENM4Q6N022 2769 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 PIEZO2Q9H5I5 2752 aa15.01□□□□□ -0.01
VAPA-209ENST00000585042 AHCTF1Q8WYP5 2266 aa15□□□□□ -0.01
VAPA-209ENST00000585042 LRRC53A6NM62 1247 aa15□□□□□ -0.01
VAPA-209ENST00000585042 RHPN2P1A8MT19 583 aa15□□□□□ -0.01
VAPA-209ENST00000585042 A8MX80 341 aa15□□□□□ -0.01
VAPA-209ENST00000585042 HGSO14964 777 aaPredicted RBP15□□□□□ -0.01
VAPA-209ENST00000585042 B4GAT1O43505 415 aa15□□□□□ -0.01
VAPA-209ENST00000585042 MAFKO60675 156 aa15□□□□□ -0.01
VAPA-209ENST00000585042 CPP00450 1065 aa15□□□□□ -0.01
VAPA-209ENST00000585042 HGFP14210 728 aa15□□□□□ -0.01
VAPA-209ENST00000585042 CDH6P55285 790 aa15□□□□□ -0.01
VAPA-209ENST00000585042 TYRO3Q06418 890 aa15□□□□□ -0.01
VAPA-209ENST00000585042 TRA2AQ13595 282 aaKnown RBP eCLIP15□□□□□ -0.01
VAPA-209ENST00000585042 PIGHQ14442 188 aaPredicted RBP15□□□□□ -0.01
VAPA-209ENST00000585042 CNGA3Q16281 694 aa15□□□□□ -0.01
VAPA-209ENST00000585042 TMCO3Q6UWJ1 677 aa15□□□□□ -0.01
VAPA-209ENST00000585042 ZNF571Q7Z3V5 609 aaPredicted RBP15□□□□□ -0.01
VAPA-209ENST00000585042 POLNQ7Z5Q5 900 aa15□□□□□ -0.01
VAPA-209ENST00000585042 DTX1Q86Y01 620 aa15□□□□□ -0.01
VAPA-209ENST00000585042 NRROSQ86YC3 692 aa15□□□□□ -0.01
VAPA-209ENST00000585042 RAVER1Q8IY67 606 aaKnown RBP15□□□□□ -0.01
VAPA-209ENST00000585042 NDUFAF2Q8N183 169 aa15□□□□□ -0.01
VAPA-209ENST00000585042 CCL4L1Q8NHW4 92 aa15□□□□□ -0.01
VAPA-209ENST00000585042 ZDHHC1Q8WTX9 485 aa15□□□□□ -0.01
VAPA-209ENST00000585042 DTD2Q96FN9 168 aa15□□□□□ -0.01
VAPA-209ENST00000585042 SCARF2Q96GP6 870 aaPredicted RBP15□□□□□ -0.01
VAPA-209ENST00000585042 SEMA3CQ99985 751 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms