RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 LRRC66Q68CR7 880 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 TCEAL6Q6IPX3 200 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 SLC41A1Q8IVJ1 513 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 PDCD7Q8N8D1 485 aaKnown RBP13.89□□□□□ -0.19
TRAF4-215ENST00000584944 BLOC1S5Q8TDH9 187 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 TCEAL3Q969E4 200 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 APOL2Q9BQE5 337 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 ETNK1Q9HBU6 452 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 RAD18Q9NS91 495 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 PKD2L2Q9NZM6 624 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 CDC23Q9UJX2 597 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 THADAQ6YHU6 1953 aa13.89□□□□□ -0.19
TRAF4-215ENST00000584944 USP24Q9UPU5 2620 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 C2orf81A6NN90 581 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 AP3B1O00203 1094 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 WNT9AO14904 365 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 KHNYNO15037 678 aaKnown RBP13.88□□□□□ -0.19
TRAF4-215ENST00000584944 LATO43561 262 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 FZD6O60353 706 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 HEXIM1O94992 359 aaKnown RBP13.88□□□□□ -0.19
TRAF4-215ENST00000584944 METTL18O95568 372 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 AP2A1O95782 977 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 IGHV4-34P06331 123 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 PIRTP0C851 137 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 ZSCAN5DPP0CG00 497 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 RACK1P63244 317 aaKnown RBP13.88□□□□□ -0.19
TRAF4-215ENST00000584944 PDE1BQ01064 536 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 SPARCL1Q14515 664 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 QPCTQ16769 361 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 DUOXA1Q1HG43 343 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 ZNF284Q2VY69 593 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 TTC27Q6P3X3 843 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 KDELC1Q6UW63 502 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 SYDE1Q6ZW31 735 aaPredicted RBP13.88□□□□□ -0.19
TRAF4-215ENST00000584944 GLT6D1Q7Z4J2 308 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 MAATS1Q7Z4T9 603 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 NUS1Q96E22 293 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 MRGPRX2Q96LB1 330 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 MCCC1Q96RQ3 725 aaPredicted RBP13.88□□□□□ -0.19
TRAF4-215ENST00000584944 KRT12Q99456 494 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 C1QTNF2Q9BXJ5 285 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 TRABDQ9H4I3 376 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 ZFYVE1Q9HBF4 777 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 MAGEE1Q9HCI5 957 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 SHOC2Q9UQ13 582 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 PKP3Q9Y446 797 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 GON4LQ3T8J9 2241 aa13.88□□□□□ -0.19
TRAF4-215ENST00000584944 LOC285095A0A1B0GVY8 99 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 PSMD11O00231 422 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 NDC80O14777 642 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 USP12O75317 370 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 RECQL5O94762 991 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-215ENST00000584944 KCNK5O95279 499 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 CRTAMO95727 393 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 PRLP01236 227 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 SYPP08247 313 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 CD38P28907 300 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 THOP1P52888 689 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 SHC2P98077 582 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 LAMB3Q13751 1172 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 SEPT6Q14141 434 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 DHX34Q14147 1143 aaKnown RBP13.87□□□□□ -0.19
TRAF4-215ENST00000584944 CNGA3Q16281 694 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 ST3GAL2Q16842 350 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 TMEM259Q4ZIN3 620 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 TRIM61Q5EBN2 209 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 CRTC1Q6UUV9 634 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 LIPIQ6XZB0 460 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 PTAR1Q7Z6K3 402 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-215ENST00000584944 PRUNE1Q86TP1 453 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 SPATA4Q8NEY3 305 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 FAM174AQ8TBP5 190 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 DNASE2BQ8WZ79 361 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 TADA1Q96BN2 335 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 NSMCE3Q96MG7 304 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 TRIB3Q96RU7 358 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 TM9SF3Q9HD45 589 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 FZD3Q9NPG1 666 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 PCYOX1Q9UHG3 505 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 PILRBQ9UKJ0 227 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 ANGPTL2Q9UKU9 493 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 ZFR2Q9UPR6 939 aaKnown RBP13.87□□□□□ -0.19
TRAF4-215ENST00000584944 FNDC3AQ9Y2H6 1198 aaKnown RBP13.87□□□□□ -0.19
TRAF4-215ENST00000584944 COQ6Q9Y2Z9 468 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 ZNF711Q9Y462 761 aa13.87□□□□□ -0.19
TRAF4-215ENST00000584944 A6NNZ2 444 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 CLDN7O95471 211 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 PCCBP05166 539 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 CHRNA4P43681 627 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 CSNK1EP49674 416 aaKnown RBP13.86□□□□□ -0.19
TRAF4-215ENST00000584944 CDK16Q00536 496 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 CDH17Q12864 832 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 SEMA5AQ13591 1074 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 LYSMD3Q7Z3D4 306 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 PCGF5Q86SE9 256 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 TSPAN33Q86UF1 283 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 DENND6BQ8NEG7 585 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 ASB12Q8WXK4 309 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 KLHDC7BQ96G42 594 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 SLC6A18Q96N87 628 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms