RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 PALMO75781 387 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 ECEL1O95672 775 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 EEF1GP26641 437 aaKnown RBP16.17■□□□□ 0.18
SREBF1-221ENST00000583080 CD1CP29017 333 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 STAT1P42224 750 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 ATP1A2P50993 1020 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 NDST2P52849 883 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 POLE2P56282 527 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 BCL2L1Q07817 233 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 SKIDA1Q1XH10 827 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 PPP1R15BQ5SWA1 713 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 NKAIN2Q5VXU1 208 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 BORAQ6PGQ7 559 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 SLC30A9Q6PML9 568 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 HEATR4Q86WZ0 1026 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 ARHGAP12Q8IWW6 846 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 NPWQ8N729 165 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 PAF1Q8N7H5 531 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 ZNF564Q8TBZ8 553 aaPredicted RBP16.17■□□□□ 0.18
SREBF1-221ENST00000583080 NUS1Q96E22 293 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 COQ10AQ96MF6 247 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 CINPQ9BW66 212 aaPredicted RBP16.17■□□□□ 0.18
SREBF1-221ENST00000583080 CLSTN2Q9H4D0 955 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 AKAP7Q9P0M2 348 aaPredicted RBP16.17■□□□□ 0.18
SREBF1-221ENST00000583080 TMEM9Q9P0T7 183 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 B3GALT1Q9Y5Z6 326 aa16.17■□□□□ 0.18
SREBF1-221ENST00000583080 LRRK2Q5S007 2527 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 TTC24A2A3L6 582 aaPredicted RBP16.16■□□□□ 0.18
SREBF1-221ENST00000583080 ARHGAP42A6NI28 874 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 CEACAM5P06731 702 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 MPSTP25325 297 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 UGT1A3P35503 534 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 GNPDA1P46926 289 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 AIF1P55008 147 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 ILF3Q12906 894 aaKnown RBP eCLIP16.16■□□□□ 0.18
SREBF1-221ENST00000583080 CNGA3Q16281 694 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 TSR1Q2NL82 804 aaKnown RBP16.16■□□□□ 0.18
SREBF1-221ENST00000583080 NAGSQ8N159 534 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 ART4Q93070 314 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 TAAR9Q96RI9 348 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 CNPY3Q9BT09 278 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 GSDMCQ9BYG8 508 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 FRMD8Q9BZ67 464 aaPredicted RBP16.16■□□□□ 0.18
SREBF1-221ENST00000583080 ADNPQ9H2P0 1102 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 SP110Q9HB58 689 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 SEPT11Q9NVA2 429 aaKnown RBP16.16■□□□□ 0.18
SREBF1-221ENST00000583080 ANKMY1Q9P2S6 941 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 SUFUQ9UMX1 484 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 AP4E1Q9UPM8 1137 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 PCDHGA3Q9Y5H0 932 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 NBASA2RRP1 2371 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 RELNP78509 3460 aa16.16■□□□□ 0.18
SREBF1-221ENST00000583080 EEF2KO00418 725 aaKnown RBP16.15■□□□□ 0.18
SREBF1-221ENST00000583080 THRAP10827 490 aa16.15■□□□□ 0.18
SREBF1-221ENST00000583080 POLD2P49005 469 aa16.15■□□□□ 0.18
SREBF1-221ENST00000583080 SCNN1BP51168 640 aa16.15■□□□□ 0.18
SREBF1-221ENST00000583080 LIMK2P53671 638 aa16.15■□□□□ 0.18
SREBF1-221ENST00000583080 KCNAB2Q13303 367 aa16.15■□□□□ 0.18
SREBF1-221ENST00000583080 KRT31Q15323 416 aa16.15■□□□□ 0.18
SREBF1-221ENST00000583080 DENND2CQ68D51 928 aa16.15■□□□□ 0.18
SREBF1-221ENST00000583080 TP53INP2Q8IXH6 220 aa16.15■□□□□ 0.18
SREBF1-221ENST00000583080 IL22RA1Q8N6P7 574 aa16.15■□□□□ 0.18
SREBF1-221ENST00000583080 PEBP4Q96S96 227 aa16.15■□□□□ 0.18
SREBF1-221ENST00000583080 TEX101Q9BY14 249 aa16.15■□□□□ 0.18
SREBF1-221ENST00000583080 PHPT1Q9NRX4 125 aaPredicted RBP16.15■□□□□ 0.18
SREBF1-221ENST00000583080 SIK3Q9Y2K2 1263 aa16.15■□□□□ 0.18
SREBF1-221ENST00000583080 PLEKHM1Q9Y4G2 1056 aa16.15■□□□□ 0.18
SREBF1-221ENST00000583080 IGHV1OR21-1A0A087WYE8 117 aa16.14■□□□□ 0.17
SREBF1-221ENST00000583080 ANKRD62A6NC57 917 aa16.14■□□□□ 0.17
SREBF1-221ENST00000583080 DFFAO00273 331 aa16.14■□□□□ 0.17
SREBF1-221ENST00000583080 PDE2AO00408 941 aaPredicted RBP16.14■□□□□ 0.17
SREBF1-221ENST00000583080 PPM1DO15297 605 aa16.14■□□□□ 0.17
SREBF1-221ENST00000583080 LHCGRP22888 699 aa16.14■□□□□ 0.17
SREBF1-221ENST00000583080 HTR7P34969 479 aa16.14■□□□□ 0.17
SREBF1-221ENST00000583080 ETV3P41162 512 aa16.14■□□□□ 0.17
SREBF1-221ENST00000583080 AP1S1P61966 158 aa16.14■□□□□ 0.17
SREBF1-221ENST00000583080 CDK3Q00526 305 aa16.14■□□□□ 0.17
SREBF1-221ENST00000583080 CTBSQ01459 385 aa16.14■□□□□ 0.17
SREBF1-221ENST00000583080 PTPRRQ15256 657 aa16.14■□□□□ 0.17
SREBF1-221ENST00000583080 CLPPQ16740 277 aaPredicted RBP16.14■□□□□ 0.17
SREBF1-221ENST00000583080 HSD11B1LQ7Z5J1 315 aa16.14■□□□□ 0.17
SREBF1-221ENST00000583080 KCTD15Q96SI1 283 aaPredicted RBP16.14■□□□□ 0.17
SREBF1-221ENST00000583080 DHX35Q9H5Z1 703 aaKnown RBP16.14■□□□□ 0.17
SREBF1-221ENST00000583080 TRNAU1APQ9NX07 287 aaKnown RBP16.14■□□□□ 0.17
SREBF1-221ENST00000583080 OCIAD1Q9NX40 245 aa16.14■□□□□ 0.17
SREBF1-221ENST00000583080 DACH1Q9UI36 760 aa16.14■□□□□ 0.17
SREBF1-221ENST00000583080 DUX1O43812 170 aa16.13■□□□□ 0.17
SREBF1-221ENST00000583080 RAD1O60671 282 aa16.13■□□□□ 0.17
SREBF1-221ENST00000583080 HEXIM1O94992 359 aaKnown RBP16.13■□□□□ 0.17
SREBF1-221ENST00000583080 POLR2LP62875 67 aaKnown RBP16.13■□□□□ 0.17
SREBF1-221ENST00000583080 BIRC2Q13490 618 aa16.13■□□□□ 0.17
SREBF1-221ENST00000583080 TRA2AQ13595 282 aaKnown RBP eCLIP16.13■□□□□ 0.17
SREBF1-221ENST00000583080 IGFBP7Q16270 282 aa16.13■□□□□ 0.17
SREBF1-221ENST00000583080 CDKAL1Q5VV42 579 aa16.13■□□□□ 0.17
SREBF1-221ENST00000583080 DCUN1D2Q6PH85 259 aa16.13■□□□□ 0.17
SREBF1-221ENST00000583080 DOK6Q6PKX4 331 aa16.13■□□□□ 0.17
SREBF1-221ENST00000583080 RFX8Q6ZV50 586 aa16.13■□□□□ 0.17
SREBF1-221ENST00000583080 ZNF761Q86XN6 746 aaPredicted RBP16.13■□□□□ 0.17
SREBF1-221ENST00000583080 CACNA2D3Q8IZS8 1091 aa16.13■□□□□ 0.17
SREBF1-221ENST00000583080 ARFGAP1Q8N6T3 406 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms